Job Description P08179 Confidence 100.00% Date Thu Jan 5 11:00:44 GMT 2012 Rank 15 Aligned Residues 195 % Identity 21% Template c1yrwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein arna; PDBTitle: crystal structure of e.coli arna transformylase domain Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																												.
Query SS confidence														.	.																												.
Query Sequence		M	N	I	V	V	L	I	S	G	N	G	S	.	.	N	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	.	A	F	G	L	E	R	A	R	Q	A	G	I	A	T	H	T	L	I	A	S	A	F	D	S	R	E	A	Y	D	R	E	L	I	H	E	I	D	M
Query Conservation														.	.																												.
Alig confidence														.	.											.	.	.	.	.	.												.																.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.																												.	.	.	.	.	.	.
Template Sequence		M	K	T	V	V	F	A	Y	H	D	M	G	C	L	G	I	E	A	L	L	A	A	G	Y	.	.	.	.	.	.	E	I	S	A	I	F	T	H	T	D	F	Y	G	S	V	A	R	L	A	A	E	R	G	I	P	V	Y	.	.	.	.	.	.	.	A	P	D	N	V	N	H	P	L	W	V	E	R	I	A	Q
Template Known Secondary structure																							T	T		.	.	.	.	.	.																							T					.	.	.	.	.	.	.			S				S
Template Predicted Secondary structure																										.	.	.	.	.	.																												.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.							.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	P	D	V	V	V	L	A	G	F	M	R	I	L	S	P	A	F	V	S	H	Y	A	G	R	L	L	N	I	H	P	S	L	L	P	K	Y	P	G	L	H	T	H	R	Q	A	L	E	N	G	D	E	E	H	G	T	S	V	H	F	V	T	D	E	L	D	G	G	P	V	I	L	Q	A	K	V	P	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	P	D	V	I	F	S	F	Y	Y	R	H	L	I	Y	D	E	I	L	Q	L	A	P	A	G	A	F	N	L	H	G	S	L	L	P	K	Y	R	G	R	A	P	L	N	W	V	L	V	N	G	E	T	E	T	G	V	T	L	H	R	M	V	K	R	A	D	A	G	A	I	V	A	Q	L	R	I	A	I	A
Template Known Secondary structure					S						S			S								T	T		T	T							S	S	S	T	T	T	T			S									T	T		S											S	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		A	G	D	S	E	D	D	I	T	A	R	V	Q	T	Q	E	H	A	I	Y	P	L	V	I	S	W	F	A	D	G	R	L	.	.	.	K	M	H	E	N	A	A	W	L	D	G	Q	R	L	P	P	Q	G	Y
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.
Template Conservation
Template Sequence		P	D	D	I	A	I	T	L	H	H	K	L	C	H	A	A	R	Q	L	L	E	Q	T	L	P	A	I	K	H	G	N	I	L	E	I	A	Q	R	E	N	E	A	T	C	F	G	R	R	T	P	D	D	S	F
Template Known Secondary structure		T	T																											T						B				G	G	G									G	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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