Job Description P08179 Confidence 67.00% Date Thu Jan 5 11:00:44 GMT 2012 Rank 92 Aligned Residues 109 % Identity 19% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																																					.
Query SS confidence												.																																																																					.
Query Sequence		M	N	I	V	V	L	I	S	G	N	.	G	S	N	L	Q	A	I	I	D	A	C	K	T	N	K	I	K	G	T	V	R	A	V	F	S	N	K	A	D	A	F	G	L	E	R	A	R	Q	A	G	I	A	T	H	T	L	I	A	S	A	F	D	S	R	E	A	Y	D	R	E	L	I	H	E	I	D	M	Y	.
Query Conservation												.																																																																					.
Alig confidence												.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	I	G	L	L	G	D	L	K	Y	G	R	T	V	H	S	L	A	E	A	L	T	F	Y	D	V	E	L	Y	L	I	S	P	E	L	L	R	M	P	R	H	I	V	E	E	L	R	E	K	G	M	K	V	V	E	T	T	T	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	I	G
Template Known Secondary structure								S		T	T	T											G	G	G	S										G	G	G													T	T							S		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.																.	.	.	220
		79	80	.	.	.	.	.	.	.	.																	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	D	V	V	V	L	A	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	I	L	S	P	A	F	V	S	H	Y	A	G	R	L	L	N	I	H	P	S	L	L	P	K	Y	P	G	L	H	T	H	R	Q	A	L	E	N	G	D	E	E	H	G	T	S	V	H	F	V	T	D	E
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	D	V	L	Y	V	T	R	I	Q	K	E	R	F	P	D	E	Q	E	Y	L	K	V	K	G	S	Y	Q	V	N	L	K	V	L	E	K	A	K	D	E	L	R	I	M	H	P	L	P	.	.	.	.	R	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	H	P	E
Template Known Secondary structure		T		S									G	G	G	S	S	S						T	T	T	T				B		T	T	G	G	G	G	S		T	T							S		.	.	.	.		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	B		G	G
Template Predicted Secondary structure																																																			.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.					270	.	.																				.	.	.	.	.
		143	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	G	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	N	T	K
Template Known Secondary structure		G	G	G	S	T
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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