|   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |
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|  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | F | A | L | R | N | I | S | F | R | V | P | G | R | T | L | L | H | P | L | S | L | T | F | P | A | G | K | V | T | G | L | I | G | H | N | G | S | G | K | S | T | L | L | K | M | L | G | R | H | Q | P | P | S | E | G | E | I | L | L | D | A | Q | P | L | E | S | W | S | S | K | A | F | A | R | K | V | A | Y | L |
Query Conservation |   |
  |
|   |   |   |
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|   |   |   |   |   |   |   |   |   |
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|   |
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|   |   |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
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| . |
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| . | . |
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Template Conservation |   |
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|   |   |   |
|   |   |   | . |   |
|   |   |
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|   |   |
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|   |
|   |
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|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |
|
Template Sequence |   |
M | I | E | I | E | S | L | S | R | K | W | K | N | F | . |
S | L | D | N | L | S | L | K | V | E | S | G | E | Y | F | V | I | L | G | P | T | G | A | G | K | T | L | F | L | E | L | I | A | G | F | H | V | P | D | S | G | R | I | L | L | D | G | K | D | V | T | D | L | S | P | E | . |
. |
K | H | D | I | A | F | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
| S | S |
| . |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
|
|
| T |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
| S |  |  |  |  |  |  | T | T |  |  |
| T | T | S |
|  |  | . | . |  |  | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |
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|  |  | . | . |  |  |
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|  |  |  |
Template SS confidence |   |
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  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
. | . | . | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |
Query SS confidence |   |
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Query Sequence |   |
P | Q | Q | L | P | P | A | E | G | M | T | V | R | E | L | V | A | I | G | R | Y | P | W | H | G | A | L | G | R | F | G | A | A | D | R | E | K | V | E | E | A | I | S | L | V | G | L | K | P | L | A | H | R | L | V | D | S | L | S | G | G | E | R | Q | R | A | W | I | A | M | L | V | A | Q | D | S | R | C | L | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
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|   |
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|   |   |
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|   |
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|   |   |   |
|   |
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Alig confidence |   |
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| . | . | . | . | . | . | . |
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Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|   |
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|   |   |   |
|   |
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|
Template Sequence |   |
Y | Q | N | Y | S | L | F | P | H | M | N | V | K | K | N | L | E | F | G | M | R | M | K | K | I | K | D | . |
. |
. |
. |
. |
. |
. |
P | K | R | V | L | D | T | A | R | D | L | K | I | E | H | L | L | D | R | N | P | L | T | L | S | G | G | E | Q | Q | R | V | A | L | A | R | A | L | V | T | N | P | K | I | L | L |
Template Known Secondary structure |   |
| T | T |
|
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | T | T | T | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| S |  |  |  |
Template Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
Template SS confidence |   |
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  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
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. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |
|
|  |  |  |  |  |
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|  |  | . | . | . |  |  |  |  |  |
|
Query SS confidence |   |
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| . |
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. |
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Query Sequence |   |
L | D | E | P | T | S | A | L | D | I | A | H | Q | V | D | V | L | S | L | V | H | R | L | S | Q | E | R | G | L | T | V | I | A | V | L | H | D | I | N | M | A | A | R | Y | C | D | Y | L | V | A | L | R | G | G | E | M | I | A | Q | G | T | P | A | E | I | M | R | G | E | T | . |
. |
. |
L | E | M | I | Y | G |
Query Conservation |   |
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|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
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|   |   |
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|   |   |   |   |   |   |   |   |   |
|   |
|   |
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|   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   | . | . | . |   |   |   |   |   |   |
Alig confidence |   |
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| . | . | . |
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Template Conservation |   |
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|   |
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|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
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|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
L | D | E | P | L | S | A | L | D | P | R | T | Q | E | N | A | R | E | M | L | S | V | L | H | K | K | N | K | L | T | V | L | H | I | T | H | D | Q | T | E | A | R | I | M | A | D | R | I | A | V | V | M | D | G | K | L | I | Q | V | G | K | P | E | E | I | F | E | K | P | V | E | G | R | V | A | S | F | V | G |
Template Known Secondary structure |   |
 |  | S | S | S | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  | S | S | S |
|  |  |  |  |  |
|  |  |  |  |  | S | S |
|
| T | T |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
151 | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
  |