Job Description P07821 Confidence 97.61% Date Thu Jan 5 11:00:34 GMT 2012 Rank 129 Aligned Residues 169 % Identity 16% Template c3r8cB_ PDB info PDB header:transferase Chain: B: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of cytidylate kinase (cmk) from mycobacterium2 abscessus Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		V	T	G	L	I	G	H	N	G	S	G	K	S	T	L	L	K	M	L	G	R	H	Q	P	P	S	E	G	E	I	L	L	D	A	Q	P	L	.	.	.	.	.	.	.	.	.	.	E	S	W	S	S	K	A	F	A	R	K	V	A	Y	L	P	Q	Q	L	P	P	A	E	G	M	T	V	R	E	L	V	A	I
Query Conservation																																							.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		V	V	A	V	D	G	P	S	G	T	G	K	S	S	V	A	K	E	L	A	R	Q	L	.	.	.	.	G	A	S	Y	L	D	T	G	A	M	Y	R	I	V	T	L	W	V	L	R	A	G	V	D	L	T	D	P	A	A	I	A	A	A	T	D	Q	V	P	M	S	V	S	S	D	P	D	A	Q	T	A	L	L
Template Known Secondary structure									S	S	S	S												T	.	.	.	.	T																					T			T	T								T	T	T	T									T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.					.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	Y	P	W	H	G	A	L	G	R	F	G	A	A	D	R	E	K	V	E	E	A	I	S	L	V	G	L	K	P	L	A	H	R	L	V	D	S	L	S	G	G	E	R	Q	R	A	W	I	A	M	L	V	.	.	.	.	A	Q	D	S	R	C	L	L	L	D	E	P	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																					.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	A	G	E	D	V	S	V	P	I	R	G	N	E	V	T	G	A	V	S	A	V	S	A	V	P	A	V	R	E	R	L	V	R	Q	Q	R	E	L	A	E	S	S	G	A	V	V	V	E	G	R	D	I	G	T	V	V	L	P	D	A	D	V	K	I	Y	L	T	A	S	A	Q	A	R	A	Q	R	R	N
Template Known Secondary structure		.	.	T	T				T	T	G	G	G	S												T	S																	T	T	S	S					S	S	S							T	T		S
Template Predicted Secondary structure		.	.
Template SS confidence
				77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		T	S	A	L	D	I	A	H	Q	V	D	V	L	S	L	V	H	R	L	S	Q	E	R	G	L	T	V	I	A	V	L	H	.	D	I	N	M	A	A	R
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		L	A	D	V	Q	R	R	D	H	L	D	S	T	R	A	V	S	P	L	R	P	A	E	D	A	L	E	V	D	T	S	D	M	T	Q	E	Q	V	V	A
Template Known Secondary structure																S	S	S						T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions