Return to main results Retrieve Phyre Job Id

Job DescriptionP07821
Confidence100.00%DateThu Jan 5 11:00:34 GMT 2012
Rank14Aligned Residues225
% Identity33%Templatec3dhwC_
PDB info PDB header:membrane protein/hydrolaseChain: C: PDB Molecule:methionine import atp-binding protein metn; PDBTitle: crystal structure of methionine importer metni
Resolution3.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.... .....30.........40.........50.........60.........70.........80....
Predicted Secondary structure 

....





























..
Query SS confidence 













. . . .



























































. .
Query Sequence  TFALRNISFRVPGR. . . . TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFA. .
Query Conservation   
   

       ....  
  


 
  

   


 








  
 
      
 
   
            ..
Alig confidence 













....



























































..
Template Conservation 

    
 
 
         
  


 
  

   
 
 








  
 
      
 
   
              
Template Sequence  MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKA
Template Known Secondary structure 

SS

SS
STTSSTTSS

STT
TT
Template Predicted Secondary structure 








































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   85....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure  .












































Query SS confidence  .














































































Query Sequence  . RKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVA
Query Conservation  .  
             

 
 
                         
    
          

 

  

 




 
Alig confidence  .























....


















































Template Conservation     
  
 
   
    

      ....                   
    
          




 


 

 

 
Template Sequence  RRQIGMIFQHFNLLSSRTVFGNVAL. . . . PLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALA
Template Known Secondary structure 

SS



TTSB....TTT

TTSTTTTTSS
BS


Template Predicted Secondary structure 












....
























Template SS confidence 















































































   81........90.........100..... ....110.........120.........130.........140.........150......
 
   164.....170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 
























Query SS confidence 











































































Query Sequence  QDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGE
Query Conservation    
 







  

      
   
  
    
 


  

         
 
 

  
 
   
   

    
Alig confidence 











































































Template Conservation    
 







  

      
   
  
    
 


 


       
 
 
 

  
 
   
         
Template Sequence  SNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHP
Template Known Secondary structure  T

SSGGGSS


BS

STTTTTTT
SS
Template Predicted Secondary structure 
























Template SS confidence 











































































   157..160.........170.........180.........190.........200.........210.........220.........230..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions