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Job DescriptionP07821
Confidence100.00%DateThu Jan 5 11:00:34 GMT 2012
Rank54Aligned Residues236
% Identity27%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSK
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Template Sequence  ERVDVERETLVEYPRLVKDYGSFK. LEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT. . . . . . . .
Template Known Secondary structure  TS








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   334.....340.........350....... ..360.........370.........380.........390.........400....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAML
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Template Sequence  . . . . . VAYKPQYIKAEYEGTVYELLSKIDSSK. . . . . . . . LNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAAT
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   405....410.........420.........430. ........440.........450.........460.........470.
 
   162.......170.........180.........190.........200.........210.........220.. .......230.........
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Query Sequence  VAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYLVALR. . GGEMIAQGTPAEIMRGE
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Template Sequence  LLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMREG.
Template Known Secondary structure  TS

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   472.......480.........490.........500.........510.........520.........530.........540.........550
 
   240.........250.........260
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Query Sequence  TLEMIYGIPMGILPHPAGAAP
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Template Sequence  MNRFLASVGITFRRDPDSGRP
Template Known Secondary structure  TTTT


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   551........560.........570.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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