Job Description P07821 Confidence 100.00% Date Thu Jan 5 11:00:34 GMT 2012 Rank 50 Aligned Residues 211 % Identity 23% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	L	R	N	I	S	F	R	V	P	G	R	T	L	L	H	P	L	S	L	T	F	P	A	G	K	V	T	G	L	I	G	H	N	G	S	G	K	S	T	L	L	K	M	L	G	R	H	Q	P	P	S	E	G	E	I	L	L	D	A	Q	P	L	E	S	W	S	S	K	A	F	A	R	K	V	A	Y	L	P
Query Conservation
Alig confidence														.	.																																								.
Template Conservation														.	.																																								.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R	S	I	I	G	I	V	P
Template Known Secondary structure														.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S							T	T
Template Predicted Secondary structure														.	.																																								.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		Q	Q	L	P	P	A	E	G	M	T	V	R	E	L	V	A	I	G	R	Y	P	W	H	G	A	L	G	R	F	G	A	A	D	R	E	K	V	E	E	A	I	S	L	V	G	L	K	P	L	A	H	R	.	.	.	.	.	L	V	D	S	L	S	G	G	E	R	Q	R	A	W	I	A	M	L	V	A	Q	D	S
Query Conservation																																																						.	.	.	.	.
Alig confidence										.																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation										.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	D	T	I	L	F	N	E	.	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	D	E	E	.	.	.	.	.	.	.	.	.	.	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P
Template Known Secondary structure		S	S					S	S	.	B							T	T	S	T	T						.	.	.	.	.	.	.	.	.	.								T	T								S	T	T	G	G	G		B																		T
Template Predicted Secondary structure										.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		R	C	L	L	L	D	E	P	T	S	A	L	D	I	A	H	Q	V	D	V	L	S	L	V	H	R	L	S	Q	E	R	G	L	T	V	I	A	V	L	H	D	I	N	M	A	A	R	Y	C	D	Y	L	V	A	L	R	G	G	E	M	I	A	Q	G	T	P	A	E	I	M	.	R	G	E	T	L	E	M	I	Y
Query Conservation																																																																								.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																									.																									.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		K	I	V	I	F	D	D	S	K	T	.	.	.	.	.	.	.	.	.	.	.	E	Y	L	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N	G	E	Y	A	E	M	W
Template Known Secondary structure		S										.	.	.	.	.	.	.	.	.	.	.																			S	S	G	G	G	S	.	T	T		S							T	T															T	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.												.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		246	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	M	Q
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		252	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions