Job Description P07821 Confidence 97.39% Date Thu Jan 5 11:00:34 GMT 2012 Rank 140 Aligned Residues 160 % Identity 15% Template c2dflA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament Resolution 2.90 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	A	G	K	V	T	G	L	I	G	H	N	G	S	G	K	S	T	L	L	K	M	L	G	R	H	Q	P	P	S	E	G	E	I	L	L	D	A	Q	P	L	E	S	W	S	S	K	A	F	A	R	K	V	A	Y	L	P	Q	Q	L	P	P	A	E	G	M	T	V	R	E	L	V	A	I	G	R	Y	P	W
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		I	E	T	R	T	M	T	E	F	F	G	E	F	G	S	G	K	T	Q	L	C	H	Q	L	S	V	N	V	Q	L	P	P	E	K	G	G	L	S	G	K	A	V	Y	I	D	T	E	G	T	F	R	W	E	R	I	E	N	M	A	K	A	L	G	L	D	I	D	N	V	M	N	N	I	Y	Y	.	.	.	.	.
Template Known Secondary structure		B		T	T	S							S	T	T	S	S	T	T										S	S	S		G	G	G	T	S		S								S	S	S															T									T				.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.													.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	A	L	G	R	F	G	A	A	D	R	E	K	V	E	E	A	I	S	L	V	G	L	K	P	L	A	H	R	L	V	D	S	L	S	G	G	E	R	Q	R	A	W	I	A	M	L	V	A	Q	D	S	R	C	L	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	E	P	T	S	A	L	D	I	A
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	I	R	A	I	N	T	D	H	Q	I	A	I	V	D	D	L	Q	E	L	V	S	K	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	K	L	I	V	V	D	S	V	T	S	H	F	R	A	E	Y	P	G	R	E	N	L	A	V	R	Q	Q
Template Known Secondary structure		.	.					S										T									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T									T	T							S		T	T	T	S	T	T
Template Predicted Secondary structure		.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																										.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	V	D	V	L	S	L	V	H	R	L	S	Q	E	R	G	L	T	V	I	A	V	L	H	D	I	N	M	A	A	R	Y	C	D	Y	L	V	A	L	R	G	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	N	K	H	L	H	Q	L	T	R	L	A	E	V	Y	D	I	A	V	I	I	T	N	Q	V	M	H	T	L	Y	H	V	P	G	I	R	I	Q	L	K	K	S	R
Template Known Secondary structure																T	T	T															S	S		S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions