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Job DescriptionP07821
Confidence100.00%DateThu Jan 5 11:00:34 GMT 2012
Rank7Aligned Residues228
% Identity25%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20. ........30.........40.........50.........60.........70.........80.........
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Query Sequence  TFALRNISFRV. PGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAY
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Template Sequence  TIEFVGVEKIYPGGARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. . KRNVGL
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TTSTT

TT

STTSSTSS

STT
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GG..GSS
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   14.....20.........30.........40.........50.........60.........70.........80..... ....90.
 
   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  LPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCL
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Template Sequence  VFQNYALFQHMTVYDNVSF. . . . GLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVL
Template Known Secondary structure  TT



TTS
T....TGGGTT

TT
GGGTTS
GGGS
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   92.......100.........110 .........120.........130.........140.........150.........160.......
 
   170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  LLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMRGETLEMI
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Template Sequence  LFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFV
Template Known Secondary structure  STTTTS


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   168.170.........180.........190.........200.........210.........220.........230.........240..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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