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Job DescriptionP07821
Confidence100.00%DateThu Jan 5 11:00:34 GMT 2012
Rank46Aligned Residues236
% Identity28%Templatec1yqtA_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSK
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Template Sequence  ERVEIERETLVTYPRLVKDYGSFR. LEVEPGEIKKGEVIGIVGPNGIGKTTFVKXLAGVEEPTEGKIEWDL. . . . . . . . .
Template Known Secondary structure  GGGSS




TT.

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   330.........340.........350... ......360.........370.........380.........390.........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AFARKVAYLPQQLPPAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAML
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Template Sequence  . . . . TVAYKPQYIKADYEGTVYELLSKIDASKLNSNFY. . . . . . . . KTELLKPLGIIDLYDREVNELSGGELQRVAIAAT
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SS




SSBT
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GGGTTSBGGG

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   400.........410.........420.........430... ......440.........450.........460.......
 
   162.......170.........180.........190.........200.........210.........220.........230....... ..
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Query Sequence  VAQDSRCLLLDEPTSALDIAHQVDVLSLVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEIMR. . GE
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Template Sequence  LLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLXEKNEKTALVVEHDVLXIDYVSDRLXVF. EGEPGKYGRALPPXGXREG
Template Known Secondary structure  TS

S
TTTT

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   468.470.........480.........490.........500.........510.........520....... ..530.........540......
 
   240.........250.........260
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Query Sequence  TLEMIYGIPMGILPHPAGAAP
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Template Sequence  XNRFLASIGITFRRDPDTGRP
Template Known Secondary structure  TTT


TTT

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   547..550.........560.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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