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Job DescriptionP07821
Confidence99.49%DateThu Jan 5 11:00:34 GMT 2012
Rank75Aligned Residues160
% Identity17%Templatec1u9iA_
PDB info PDB header:circadian clock proteinChain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  FPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTVRELVAIGRYPW
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Template Sequence  LPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDE. . . . . . . . . . . . . . . . . . PGVFVTFEETPQDIIKNARSFGW. . . . .
Template Known Secondary structure  TTSSTTSS

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   36...40.........50.........60......... 70.........80.........90..
 
   114.....120.........130.........140.........150.........160.........170........ .180.........
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Query Sequence  HGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRCLLLDEPTSAL. . . . DIAHQVDVLSL
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Template Sequence  . . . . . . DLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQYDASSVVRRELFR
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   93......100.........110.........120.........130.........140.........150.........160......
 
   190.........200.........210 .........220..
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Query Sequence  VHRLSQERGLTVIAVLHDINM. . . . . . . . . AARYCDYLVALR
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Template Sequence  LVARLKQIGATTVMTTERIEEYGPIARYGVEEFVSDNVVILR
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   167..170.........180.........190.........200........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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