Job Description P07821 Confidence 99.45% Date Thu Jan 5 11:00:34 GMT 2012 Rank 76 Aligned Residues 86 % Identity 31% Template c1ii8B_ PDB info PDB header:replication Chain: B: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		L	K	P	L	A	H	R	L	V	D	S	L	S	G	G	E	R	Q	R	A	W	I	A	.	.	.	.	.	.	M	L	V	A	Q	D	S	R	C	L	L	L	D	E	P	T	S	A	L	D	I	A	H	Q	V	D	V	L	S	L	V	H	R	L	S	Q	E	R	G	L	T	V	I	A	V	L	H	D	I	N	M
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																																						.
Template Conservation																																																																				.
Template Sequence		V	W	E	G	K	E	R	P	L	T	F	L	S	G	G	E	R	I	A	L	G	L	A	F	R	L	A	M	S	L	Y	L	A	G	E	I	S	L	L	I	L	D	E	P	T	P	Y	L	D	E	E	R	R	R	K	L	I	T	I	M	E	R	Y	L	K	K	.	I	P	Q	V	I	L	V	S	H	D	E	E	L
Template Known Secondary structure			B	T	T	B				G	G	G	S																						S	S		S								S	S	S	S		S													T	G	G	G	.	S	S							S		G	G	G
Template Predicted Secondary structure																																																																				.
Template SS confidence
		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.		.	.	.	850	.	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.			.	220	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		A	A	R	Y	C	D	Y	L	.	.	V	A	L	R	G	G
Query Conservation										.	.
Alig confidence			.							.	.
Template Conservation			.
Template Sequence		K	.	D	A	A	D	H	V	I	R	I	S	L	E	N	G
Template Known Secondary structure		G	.	G	T	S	S									S	S
Template Predicted Secondary structure			.
Template SS confidence
		860		.	.	.	.	.	.	.	.	.	870	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions