Return to main results Retrieve Phyre Job Id

Job DescriptionP39836
Confidence0.63%DateThu Jan 5 12:01:05 GMT 2012
Rank60Aligned Residues16
% Identity25%Templated1wjfa_
SCOP infoDNA/RNA-binding 3-helical bundle N-terminal Zn binding domain of HIV integrase N-terminal Zn binding domain of HIV integrase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   250.........260.....
Predicted Secondary structure 


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Query Sequence  MARRLSFNKADEITIV
Query Conservation    
 
        

 
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Template Conservation 
  

 

   

 

Template Sequence  MASDFNLPPVVAKEIV
Template Known Secondary structure  T

Template Predicted Secondary structure 


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   22.......30.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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