Return to main results Retrieve Phyre Job Id

Job DescriptionP39836
Confidence1.29%DateThu Jan 5 12:01:05 GMT 2012
Rank22Aligned Residues40
% Identity15%Templated1v54l_
SCOP infoSingle transmembrane helix Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.........50.........60....
Predicted Secondary structure 











Query SS confidence 







































Query Sequence  PARGDFVPFFENLTTAAIALLFFMHGAKLSREAIIAGGGH
Query Conservation 
  
             
  
 
  

 
    
      
Alig confidence 







































Template Conservation 

 



 
 

  


     




  

  






Template Sequence  PGKNIPFSVENKWRLLAMMTLFFGSGFAAPFFIVRHQLLK
Template Known Secondary structure  TTTSSSS

SSTT
Template Predicted Secondary structure 









Template SS confidence 







































   7..10.........20.........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions