Job Description P39836 Confidence 0.69% Date Thu Jan 5 12:01:05 GMT 2012 Rank 49 Aligned Residues 79 % Identity 13% Template c3rkoK_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:nadh-quinone oxidoreductase subunit k; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	P	F	T	L	T	L	I	T	V	V	L	L	A	S	F	F	P	A	R	G	D	F	V	P	F	F	E	N	L	T	T	A	A	I	A	L	L	F	F	M	H	G	A	K	L	S	R	E	A	I	I	A	G	G	G	H	W	R	L	H	L	W	V	M	C	S	T	F	V	L	F	P	I	L	G	V	L	F
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		L	Q	H	G	L	I	L	A	A	I	L	F	V	L	G	L	T	G	.	.	.	.	.	.	L	V	I	R	R	N	L	L	F	M	L	I	G	L	E	I	M	I	N	A	S	A	L	A	F	V	V	A	G	S	Y	W	G	Q	T	D	G	Q	V	M	Y	I	L	A	I	S	L	A	A	A	E	A	S	I	G	L
Template Known Secondary structure																				.	.	.	.	.	.						B																										T	T		S
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.							.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		87	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	W	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	L	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions