Job Description P39836 Confidence 21.71% Date Thu Jan 5 12:01:05 GMT 2012 Rank 1 Aligned Residues 103 % Identity 21% Template c1zcdA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:na(+)/h(+) antiporter 1; PDBTitle: crystal structure of the na+/h+ antiporter nhaa Resolution 3.45 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		F	E	N	L	T	T	A	A	I	A	L	L	F	F	M	H	G	A	K	L	S	R	E	A	I	I	A	G	G	G	H	W	R	L	H	L	W	V	M	C	S	T	F	V	.	.	L	F	P	I	L	G	V	L	F	A	W	W	K	P	V	N	V	D	P	M	L	Y	S	G	F	L	Y	L	C	I	L	P	A	T
Query Conservation																																														.	.
Alig confidence																																														.	.						.	.	.	.																.	.	.	.
Template Conservation																																																					.	.	.	.																.	.	.	.
Template Sequence		L	L	W	I	N	D	A	L	M	A	V	F	F	L	L	V	G	L	E	V	K	R	E	L	M	Q	G	S	L	A	S	L	R	Q	A	A	F	P	V	I	A	A	I	G	G	M	I	V	P	A	L	.	.	.	.	L	Y	L	A	F	N	Y	A	D	P	I	T	R	E	G	.	.	.	.	W	A	I	P	A	A
Template Known Secondary structure																											S	T	T	T	S	S	T	T	T	S											T	T	T	T			.	.	.	.			G	G	G			S	S	T	T					.	.	.	.	T	S	S	S	S
Template Predicted Secondary structure																																																					.	.	.	.																.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.
		112	.	.	.	.	.	.	.	120	.	.	.		.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure														.			.	.	.	.	.	.
Query SS confidence														.			.	.	.	.	.	.
Query Sequence		V	Q	S	A	I	A	F	T	S	M	A	G	.	G	N	.	.	.	.	.	.	V	A	A	A	V	C	S	A	S	A	S	S	L	L	G	I	F	L	S
Query Conservation														.			.	.	.	.	.	.
Alig confidence														.			.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	I	A	F	A	L	G	V	L	A	L	L	G	S	R	V	P	L	A	L	K	I	F	L	M	A	L	A	I	I	D	D	L	G	A	I	I	I	I
Template Known Secondary structure													S	S		S	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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