Job Description Q47155 Confidence 100.00% Date Thu Jan 5 12:36:31 GMT 2012 Rank 13 Aligned Residues 228 % Identity 46% Template d1t94a2 SCOP info DNA/RNA polymerases DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), catalytic domain Resolution 2.40

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	I	I	H	V	D	M	D	C	F	F	A	A	V	E	M	R	D	N	P	A	L	R	D	I	P	I	A	I	G	G	S	R	E	R	R	G	V	I	S	T	A	N	Y	P	A	R	K	F	G	V	R	S	A	M	P	T	G	M	A	L	K	L	C	P	H	L	T	L	L	P	G	R	F	D	A	Y	K	E
Query Conservation
Alig confidence																																					.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		N	T	I	V	H	I	D	M	D	A	F	Y	A	A	V	E	M	R	D	N	P	E	L	K	D	K	P	I	A	V	G	S	M	S	M	.	.	.	.	L	S	T	S	N	Y	H	A	R	R	F	G	V	R	A	A	M	P	G	F	I	A	K	R	L	C	P	Q	L	I	I	V	P	P	N	F	D	K	Y	R	A
Template Known Secondary structure										T	T											G	G	G	T	T	S							S	S		.	.	.	.											T	T			T	T											T	T
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	N	H	I	R	E	I	F	S	R	Y	T	S	R	I	E	P	L	S	L	D	E	A	Y	L	D	V	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	K	E	V	K	E	I	L	A	D	Y	D	P	N	F	M	A	M	S	L	D	E	A	Y	L	N	I	T	K	H	L	E	E	R	Q	N	W	P	E	D	K	R	R	Y	F	I	K	M	V	E	N	D	N	P	G	K	E	V	N	K	L	S	E	H	E	R	S	I	S	P	L	L	F	N	P	Q	I	L	Q
Template Known Secondary structure															T	T					S	S	S														T	T			G	G	G	S														G	G	G	G	G	G	S	T	T	T	T	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
			112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																								.	.
Query SS confidence		.																																																								.	.
Query Sequence		.	S	V	H	C	H	G	S	A	T	L	I	A	Q	E	I	R	Q	T	I	F	N	E	L	Q	L	T	A	S	A	G	V	A	P	V	K	F	L	A	K	I	A	S	D	M	N	K	P	N	G	Q	F	V	I	T	P	.	.	A	E	V	P	A	F	L	Q	T	L	P	L	A	K	I	P	G	V	G	K	V	S
Query Conservation		.																																																								.	.
Alig confidence		.																																																								.	.
Template Conservation
Template Sequence		N	S	V	V	F	G	T	S	A	Q	E	V	V	K	E	I	R	F	R	I	E	Q	K	T	T	L	T	A	S	A	G	I	A	P	N	T	M	L	A	K	V	C	S	D	K	N	K	P	N	G	Q	Y	Q	I	L	P	N	R	Q	A	V	M	D	F	I	K	D	L	P	I	R	K	V	S	G	I	G	K	V	T
Template Known Secondary structure								S	S																	S									S	S											T	T	T	T							S	S									T	T		B	G	G	G		T	T	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		A	A	K	L	E	A	M	G	L	R	T	C	G	D	V	Q	K	C	D	L	V	M	L	L	K	R	F	G	.	K	F	G	R	I	L	W	E	R	S	Q	G	I	D	E	R	D	V
Query Conservation																														.
Alig confidence																			.											.
Template Conservation																			.
Template Sequence		E	K	M	L	K	A	L	G	I	I	T	C	T	E	L	Y	Q	.	Q	R	A	L	L	S	L	L	F	S	E	T	S	W	H	Y	F	L	H	I	S	L	G	L	G	S	T	H	L
Template Known Secondary structure								T	T			B							.	T								S													T	T				S
Template Predicted Secondary structure																			.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions