Job Description Q47155 Confidence 100.00% Date Thu Jan 5 12:36:31 GMT 2012 Rank 15 Aligned Residues 233 % Identity 37% Template d1k1sa2 SCOP info DNA/RNA polymerases DNA/RNA polymerases Lesion bypass DNA polymerase (Y-family), catalytic domain Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	I	H	V	D	M	D	C	F	F	A	A	V	E	M	R	D	N	P	A	L	R	D	I	P	I	A	I	G	G	S	R	E	R	R	G	V	I	S	T	A	N	Y	P	A	R	K	F	G	V	R	S	A	M	P	T	G	M	A	L	K	L	C	P	H	L	T	L	L	P	G	R	F	D	A	Y	K	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	I	F	V	D	F	D	Y	F	F	A	Q	V	E	E	V	L	N	P	Q	Y	K	G	K	P	L	V	V	S	V	Y	S	G	T	S	G	A	V	A	T	A	N	Y	E	A	R	K	L	G	V	K	A	G	M	P	I	I	K	A	M	Q	I	A	P	S	A	I	Y	V	P	M	R	K	P	I	Y	E	A	F
Template Known Secondary structure									T	T									S		G	G	G	T	T	S									.														T	T	T			T	T								T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		S	N	H	I	R	E	I	F	S	R	Y	T	S	R	I	E	P	L	S	L	D	E	A	Y	L	D	V	T	D	S	V	H	.	C	H	G	S	A	T	L	I	A	Q	E	I	R	Q	T	I	F	N	E	L	Q	L	T	A	S	A	G	V	A	P	V	K	F	L	A	K	I	A	S	D	M	N	K	P	N	G	Q
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		S	N	R	I	M	N	L	L	N	K	H	A	D	K	I	E	V	A	S	I	D	E	A	Y	L	D	V	T	N	K	V	E	G	N	F	E	N	G	I	E	L	A	R	K	I	K	Q	E	I	L	E	K	E	K	I	T	V	T	V	G	V	A	P	N	K	I	L	A	K	I	I	A	D	K	S	K	P	N	G	L
Template Known Secondary structure											T	T		S							T	T							T	T	T	T	T	T																														S	S										T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		F	V	I	T	P	A	E	V	P	A	F	L	Q	T	L	P	L	A	K	I	P	G	V	G	K	V	S	A	A	K	L	E	A	M	G	L	R	T	C	G	D	V	Q	K	C	D	L	V	M	L	L	K	R	F	G	K	F	.	G	R	I	L	W	E	R	S	Q	G	I	D	E	R	D	V	N
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		G	V	I	R	P	T	E	V	Q	D	F	L	N	E	L	D	I	D	E	I	P	G	I	G	S	V	L	A	R	R	L	N	E	L	G	I	Q	K	L	R	D	I	L	S	K	N	Y	N	E	L	E	K	I	T	G	K	A	K	A	L	Y	L	L	K	L	A	Q	N	K	Y	S	E	P	V	E
Template Known Secondary structure						T	T	S							T		B	G	G	G	S	T	T	S											T	T			B	G	G	G	G	G	G	S																					T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions