Job Description Q47155 Confidence 93.37% Date Thu Jan 5 12:36:31 GMT 2012 Rank 39 Aligned Residues 54 % Identity 24% Template d1cooa_ SCOP info SAM domain-like C-terminal domain of RNA polymerase alpha subunit C-terminal domain of RNA polymerase alpha subunit Resolution UNK

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		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		L	Q	T	L	P	L	A	K	I	P	G	V	G	K	V	S	A	A	K	L	E	A	M	G	L	R	T	C	G	D	V	Q	K	C	D	L	V	M	L	L	K	R	F	G	.	.	.	K	F	G	R	I	L	W	E	R	S	Q
Query Conservation																																														.	.	.
Alig confidence											.																																			.	.	.
Template Conservation											.
Template Sequence		I	L	L	R	P	V	D	D	L	.	E	L	T	V	R	S	A	N	C	L	K	A	E	A	I	H	Y	I	G	D	L	V	Q	R	T	E	V	E	L	L	K	T	P	N	L	G	K	K	S	L	T	E	I	K	D	V	L	A
Template Known Secondary structure					S	B	G	G	G	G	.	T			T	T	T						T	T	T			B						T	S						T	T	S	T	T
Template Predicted Secondary structure											.
Template SS confidence
		252	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions