Job Description Q47155 Confidence 23.67% Date Thu Jan 5 12:36:31 GMT 2012 Rank 106 Aligned Residues 113 % Identity 12% Template c3lw9B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:invasion protein inva; PDBTitle: structure of a cytoplasmic domain of salmonella inva Resolution 1.85 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	L	D	V	T	D	S	V	H	C	H	G	S	A	T	L	I	A	Q	E	I	R	Q	T	I	F	N	E	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	A	S	A	G	V	A	P	V	K	F	L	A	K	I	A	S	D	M	N	K	P	N	G	Q	F	V	I	T	P
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.
Template Sequence		L	I	L	L	V	P	K	S	R	R	E	D	L	E	K	A	Q	L	A	E	R	X	R	S	Q	F	F	I	D	Y	G	V	R	L	P	E	V	L	L	R	D	G	E	G	L	D	D	N	S	I	V	L	L	I	N	E	I	R	.	.	.	.	.	.	V	E	Q	F	T	V	Y	F	D	L	X	R	V	V	N	Y
Template Known Secondary structure																	T	T														S					S							T	T			T	T							T	T			.	.	.	.	.	.								T	T	S				T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.							420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.
Query Sequence		A	E	V	P	A	F	L	Q	T	L	P	L	A	K	.	.	.	.	.	.	.	I	P	G	V	G	K	V	S	A	A	K	L	E	A	M	G	L	R	T	C	G	D	V	Q	K	C	D	L	V	M	L	L	K	R	F	G	K	F	G	R	I	L	W	E	R
Query Conservation																.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.			.																		.
Template Conservation																									.																		.
Template Sequence		S	D	E	V	V	S	F	G	I	N	P	T	I	H	Q	Q	G	S	S	Q	Y	F	W	.	V	T	H	E	E	G	E	K	L	R	E	X	G	Y	V	L	R	.	N	A	L	D	E	L	Y	H	C	L	A	V	T	L	A	R	N	V	N	E	Y	F	G	I
Template Known Secondary structure			T					T	T									S	S						.											T	T	T					.
Template Predicted Secondary structure																									.																		.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.		.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions