Job Description Q47155 Confidence 100.00% Date Thu Jan 5 12:36:31 GMT 2012 Rank 8 Aligned Residues 336 % Identity 24% Template c2aq4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna repair protein rev1; PDBTitle: ternary complex of the catalytic core of rev1 with dna and dctp. Resolution 2.32 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.							.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																															.	.	.
Query SS confidence																							.	.	.	.	.	.																																															.	.	.
Query Sequence		R	K	I	I	H	V	D	M	D	C	F	F	A	A	V	E	M	R	D	N	P	.	.	.	.	.	.	A	L	R	D	I	P	I	A	I	G	G	S	R	E	R	R	G	V	I	S	T	A	N	Y	P	A	R	K	F	G	V	R	S	A	M	P	T	G	M	A	L	K	L	C	P	H	.	.	.	L	T	L	L
Query Conservation																							.	.	.	.	.	.																																															.	.	.
Alig confidence																							.	.	.	.	.	.																.																															.	.	.
Template Conservation																																												.
Template Sequence		Y	I	I	F	H	I	D	F	D	C	F	F	A	T	V	A	Y	L	C	R	S	S	S	F	S	A	C	D	F	K	R	D	P	I	V	V	C	H	G	T	K	N	.	S	D	I	A	S	C	N	Y	V	A	R	S	Y	G	I	K	N	G	M	W	V	S	Q	A	E	K	M	L	P	N	G	I	K	L	I	S	L
Template Known Secondary structure										T	T	T	T							T			G	G	G	T	T			T	T	T	S						S		S	S	S	.		B		S									T	T			T	T		B						T	T			T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.																																								.
Query SS confidence																									.	.																																								.
Query Sequence		P	G	R	F	D	A	Y	K	E	A	S	N	H	I	R	E	I	F	S	R	Y	T	S	.	.	R	I	E	P	L	S	L	D	E	A	Y	L	D	V	T	D	S	V	H	C	H	G	S	A	T	L	I	A	Q	E	I	R	Q	T	I	F	N	E	L	.	Q	L	T	A	S	A	G	V	A	P	V	K	F	L	A
Query Conservation																									.	.																																								.
Alig confidence																									.	.																		.	.	.																				.
Template Conservation																																												.	.	.
Template Sequence		P	Y	T	F	E	Q	F	Q	L	K	S	E	A	F	Y	S	T	L	K	R	L	N	I	F	N	L	I	L	P	I	S	I	D	E	A	V	C	V	R	I	I	P	.	.	.	D	T	L	N	A	R	L	C	E	E	I	R	Q	E	I	F	Q	G	T	N	G	C	T	V	S	I	G	C	S	D	S	L	V	L	A
Template Known Secondary structure																						T	T			S							T	T										.	.	.																				S	S									S	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.
Predicted Secondary structure																	.																																.	.										.													.
Query SS confidence																	.																																.	.										.													.
Query Sequence		K	I	A	S	D	M	N	K	P	N	G	Q	F	V	I	.	T	P	A	E	V	P	A	F	L	Q	T	L	P	L	A	K	I	P	G	V	G	K	V	S	A	A	K	L	E	A	M	.	.	G	L	R	T	C	G	D	V	Q	.	K	C	D	L	V	M	L	L	K	R	F	G	.	K	F	G	R	I	L	W	E
Query Conservation																	.																																.	.										.													.
Alig confidence																	.																																.	.										.													.
Template Conservation
Template Sequence		R	L	A	L	K	M	A	K	P	N	G	Y	N	I	T	F	K	S	N	L	S	E	E	F	W	S	S	F	K	L	D	D	L	P	G	V	G	H	S	T	L	S	R	L	E	S	T	F	D	S	P	H	S	L	N	D	L	R	K	R	Y	T	L	D	A	L	K	A	S	V	G	S	K	L	G	M	K	I	H	L
Template Known Secondary structure										S	S							G	G	G							T	T			G	G	G	S	T	T													T	T				S																			S	S
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.								.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.																																																															.
Query SS confidence												.	.	.	.	.	.	.																																																															.
Query Sequence		R	S	Q	G	I	D	E	R	D	V	.	.	.	.	.	.	.	N	S	E	R	L	R	K	S	V	G	V	E	R	T	M	A	E	D	I	H	H	W	S	E	C	E	A	I	I	E	R	L	Y	P	E	L	E	R	R	L	A	K	V	K	P	D	L	L	I	A	R	Q	G	V	K	L	K	F	D	D	F	Q	.
Query Conservation												.	.	.	.	.	.	.																																																															.
Alig confidence												.	.	.	.	.	.	.																																																															.
Template Conservation
Template Sequence		A	L	Q	G	Q	D	D	E	E	S	L	K	I	L	Y	D	P	K	E	V	L	Q	R	K	S	L	S	I	D	I	N	W	G	I	R	F	K	N	I	T	Q	V	D	L	F	I	E	R	G	C	Q	Y	L	L	E	K	L	N	E	I	N	K	T	T	S	Q	I	T	L	K	L	M	R	R	C	K	D	A	P	I
Template Known Secondary structure			T	T	T																		S										S	S				S	S																						T	T															T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
																297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	T	Q	E	H	V	W	P	R	L	N	K	A	D	L	I	A	T	A	R	K	T	W	D	E	R	.	R	G	G	R	G	V	R	L	V	G	L	H	V	T	L	L	D	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		E	P	P	K	Y	M	G	M	G	R	C	D	S	F	S	R	S	S	R	L	G	I	P	T	N	E	F	G	I	I	A	T	E	M	K	S	L	Y	R	T	L	G	C	P	P	M	E	L	R	G	L	A	L	Q	F	N	K	L	V	D
Template Known Secondary structure		S		S	S	T	T				S																																T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions