Job Description Q47155 Confidence 25.96% Date Thu Jan 5 12:36:31 GMT 2012 Rank 102 Aligned Residues 123 % Identity 20% Template c1yqmA_ PDB info PDB header:hydrolase/dna Chain: A: PDB Molecule:n-glycosylase/dna lyase; PDBTitle: catalytically inactive human 8-oxoguanine glycosylase2 crosslinked to 7-deazaguanine containing dna Resolution 2.50 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.													.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	M	A	L	K	L	C	P	H	L	T	L	L	P	G	R	F	.	.	.	.	.	.	.	.	.	.	.	.	D	A	Y	K	E	A	S	N	H	I	R	E	I	F	S	R	Y	T	S	R	I	E	P	L	S	L	D	E	A	Y	L	D	V	T	D	S	V	H	C	H	G	S	A	T	L	I	A	Q	E	I
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.
Template Sequence		F	Q	E	V	A	Q	K	F	Q	G	V	R	L	L	R	Q	D	P	I	E	C	L	F	S	F	I	C	S	S	C	N	N	I	A	R	I	T	G	M	V	E	R	L	C	Q	A	F	G	P	R	L	I	Q	L	D	D	V	T	Y	H	G	.	.	.	.	.	.	.	.	F	P	S	L	Q	A	L	A	G	P	E
Template Known Secondary structure							T	T		T	T																	T	T	T	T																		S							T	T						.	.	.	.	.	.	.	.								T	S	T	T
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180									.	.	.	.	.	.	.	.	.	190	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.
Query Sequence		R	Q	T	I	F	N	E	L	Q	L	T	A	S	A	G	V	A	P	V	K	F	L	A	K	I	A	S	D	M	N	K	P	N	G	Q	.	.	.	.	.	.	.	F	V	I	T	P	A	E	V	P	A	F	L	Q	T	L	P	L	A	K	I	P	G	V	G	K	V	S	A	A	K	L	E	A	M	G	L	R	T
Query Conservation																																					.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																			.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation														.	.	.	.	.																																						.	.	.	.	.
Template Sequence		V	E	A	H	L	R	K	L	G	L	G	Y	.	.	.	.	.	R	A	R	Y	V	S	A	S	A	R	A	I	L	E	E	Q	G	G	L	A	W	L	Q	Q	L	R	E	S	S	Y	E	E	A	H	K	A	L	.	.	.	.	.	C	I	L	P	G	V	G	T	Q	V	A	D	C	I	C	L	M	A	L	D	K
Template Known Secondary structure									T	T		T	T	.	.	.	.	.																S		S							T	T	S	S										.	.	.	.	.	T	T	S	T	T														S	S
Template Predicted Secondary structure														.	.	.	.	.																																						.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.						.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240						.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions