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Job DescriptionP28630
Confidence81.30%DateThu Jan 5 11:44:59 GMT 2012
Rank82Aligned Residues186
% Identity18%Templated1g41a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10....... ..20.........30.........40.........50
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Query Sequence  RLYPEQLRAQLNEGL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEH
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Template Sequence  EMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. NAPFIKV
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   3......10.........20.........30.........40.........50.........60.........70.... .....80.
 
   51........60.........70..... ....80.........90..
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Query Sequence  HTFSIDPNTDWNAIFSLCQAMSLFA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SRQTLLLLLPENGPNAA. . . .
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Template Sequence  EATKFTVGKEVDSIIRDLTDSAMKLVRQQEIAKNRLIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGEYSG
Template Known Secondary structure  GGGG




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SS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   93......100...... ...110.........120.........130.........140.........150....
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Query Sequence  . . . . . . . INEQLLTLTGLLHD. . . . . . . . . DLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAAR. .
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Template Sequence  ADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHA
Template Known Secondary structure  S

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   271........280.........290.........300.........310.........320.........330.........340.........350
 
   155....160.........170.... .....180.........
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Query Sequence  . . . . . . . . . . . AKQLNLELDDAANQVLCYCY. . . . . . . . EGNLLALAQALERLS
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Template Sequence  SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLM
Template Known Secondary structure 
TTT

S


GGG
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   351........360.........370.........380.........390.........400....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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