Job Description P28630 Confidence 99.69% Date Thu Jan 5 11:44:59 GMT 2012 Rank 9 Aligned Residues 298 % Identity 11% Template c3pvsA_ PDB info PDB header:recombination Chain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa Resolution 2.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		L	R	A	Q	L	N	E	G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	.	.	D	W	N	A	I	F	S	L	C	Q	A	M	S	L	F	A	S	R	Q	T	L	L	L	L	L	P	E
Query Conservation																																																					.	.
Alig confidence																																				.	.	.	.														.	.
Template Conservation																																				.	.	.	.
Template Sequence		L	P	R	A	I	E	A	G	H	L	H	S	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	.	.	.	.	N	A	D	V	E	R	I	S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H
Template Known Secondary structure									T										S	T	T	S	S												T	.	.	.	.	T								T	T	T																			T	T									T	T	T
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.
Query Sequence		N	G	P	N	A	A	I	N	E	Q	L	L	T	L	T	G	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	S	V	Q	V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	.	.	.	.	.	.	.	N
Query Conservation																																																																										.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																						.	.	.																																					.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		R	F	.	.	.	.	.	.	.	.	.	.	A	F	L	P	H	I	E	D	G	T	I	T	F	I	G	A	T	T	E	N	P	.	.	.	S	F	E	L	N	S	A	L	L	S	R	A	R	V	Y	L	L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.								T	T	S								S	S		G	.	.	.	G	G	S	S						T	T																									T	T	T	S	S	T	T	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		117	.											.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		L	E	L	D	D	A	A	N	Q	V	L	C	Y	C	Y	E	G	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	W	P	D	G	K	.	.	.	.	.	L	T	L	P	R	V	E	Q	A	V	N	D	A	A	H	.	.	.	.	.	.	.	F	T	P	F	H	W	V	D	A	L	L	M	G	K	S	K
Query Conservation																																							.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	N	G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A	G	E	R	S	A	R	K	G	D	R	F	Y	D	L	I	S	A	L	H	K	S	V	R	G	S	A	P	D
Template Known Secondary structure																		S																S		B		T	T	S														T																							T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	L	H	I	L	Q	Q	L	R	L	E	G	S	E	P	V	I	L	L	R	T	L	Q	R	E	L	L	L	L	V	N	L	K	R	Q	S	A	H	T	P	L	R	A	L	F	D	K	H	R	V	W	Q	N	R	R	G	M	M	G	E	A	L	N	R	L	S	Q	T	Q	L	R	Q	A	V	Q	L	L	T	R
Query Conservation
Alig confidence																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.																								.	.
Template Conservation																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.																								.	.
Template Sequence		A	A	L	Y	W	Y	A	R	I	I	T	A	G	G	D	P	L	Y	V	.	.	.	.	.	.	.	A	R	R	C	L	A	I	A	S	E	D	V	G	N	A	D	P	R	A	M	Q	V	.	.	.	.	.	.	.	A	I	A	A	W	D	C	F	T	R	V	G	P	A	E	G	E	R	A	I	A	Q	A	.	.
Template Known Secondary structure													T	T							.	.	.	.	.	.	.											T	T	G	G	G		T						.	.	.	.	.	.	.											S													.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.																							.	.	.	.	.	.	.																								.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.								.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.								.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	T	L	K	Q	D	Y	G	Q	S	V	W	A	E	L	E	G	L	S	L	L	L	C	H	K	P	L	A	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	Y	L	A	C	A	P	K	S	N	A	V	Y	T	A	F	K	A	A	L	A	D	A	R	E	R	P	D	Y	D	V
Template Known Secondary structure								S																				S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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