Job Description P28630 Confidence 95.84% Date Thu Jan 5 11:44:59 GMT 2012 Rank 46 Aligned Residues 182 % Identity 15% Template c3b9pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin Resolution 2.70 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																													.	.	.	.	.																																.
Query SS confidence																																													.	.	.	.	.																																.
Query Sequence		R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	D	.	.	.	.	.	W	N	A	I	F	S	L	C	Q	A	M	S	L	F	A	S	R	Q	T	L	L	L	L	L	P	E	N	G	P	N	A	.
Query Conservation																																													.	.	.	.	.																																.
Alig confidence																																													.	.	.	.	.													.	.	.	.																.
Template Conservation																																																														.	.	.	.
Template Sequence		A	K	G	L	L	L	F	G	P	P	G	N	G	K	T	L	L	A	R	A	V	A	T	E	C	S	A	T	F	L	N	I	S	A	A	S	L	T	S	K	Y	V	G	D	G	E	K	L	V	R	A	L	F	A	V	A	R	H	M	Q	.	.	.	.	P	S	I	I	F	I	D	E	V	D	S	L	L	S	E	R
Template Known Secondary structure			S						S	S	S	S	S													T	T								S	T	T	T	S	S	S	S		S																T		.	.	.	.	S							T	G	G	G	T	S	B
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.					.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
							92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	I	N	E	Q	L	L	T	L	T	G	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	S	V	Q	V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L	E	L	D	D	A	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.											.	.																				.	.	.	.	.
Template Conservation																	.	.																				.	.	.	.	.
Template Sequence		E	A	S	R	R	L	K	T	E	F	L	V	E	F	D	.	.	G	L	P	R	I	V	V	L	A	A	T	N	R	P	Q	E	L	D	E	.	.	.	.	.	A	A	L	R	R	F	T	K	R	V	Y	V	S	L	P	D	E	Q	T	R	E	L	L	L	N	R	L	L	Q	K	Q	G	S	P	L	D	T	E	A
Template Known Secondary structure				S													.	.												S		G	G	G	B			.	.	.	.	.																													G	G	G	S			S
Template Predicted Secondary structure																	.	.																				.	.	.	.	.
Template SS confidence
		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.			.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630						.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure												.																	.	.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.	.	.
Query Sequence		N	Q	V	L	C	Y	C	Y	E	G	.	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	W	.	.	.	.	.	.	.	P	D	G	K	L	T	L	P	R	V	E	Q	A	V	N	D	A	A
Query Conservation												.																	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	R	L	A	K	I	T	D	G	Y	S	G	S	D	L	T	A	L	A	K	D	A	A	L	E	P	I	R	E	L	N	I	S	A	M	R	A	I	T	E	Q	D	F	H	S	S	L	K	R	I	R
Template Known Secondary structure									T	T	T														T	T					T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions