Job Description P28630 Confidence 78.89% Date Thu Jan 5 11:44:59 GMT 2012 Rank 84 Aligned Residues 211 % Identity 12% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	R	A	Q	L	N	E	G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	.	.	.	.	.	.	.	.	G	F	E	E	H	H	T	F	S	I	D	P	N	T	D	W	N	A	I	F	S	L	C	Q	A	.	.	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	I	R	Y	F	V	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C	R	E	V	G	G	T	P	Q	A	V	L	S	S	L	A	G	K	L	T	G	F	S	V	P
Template Known Secondary structure									T	T												T	T	S	S																			S	S	S	S	T	T													S																S
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
																71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	L	F	A	S	R	Q	T	L	L	L	L	L	P	E	N	G	P	N	A	A	I	N	E	Q	L	L	T	L	T	G	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	S	V	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Template Conservation																																																																											.	.
Template Sequence		K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	R	R	G	G	D	I	V	L	Y	Q	L	L	R	S	D	A	N	I	S	V	I	M	I	S	N	D	I	N	V	R	D	Y	M	E	P	R	V	L	S	.	.	S	L	G	P	S
Template Known Secondary structure		S	S	S	S		T												S	S	S								T	T						S	T	T	S									T	S	S	S									S	S	T	T	T	T	T	T	S							.	.	T
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																											.	.														.	.	.																		.
Query SS confidence																											.	.														.	.	.																		.
Query Sequence		V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L	E	.	.	L	D	D	A	A	N	Q	V	L	C	Y	C	Y	.	.	.	E	G	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	.	W	P	D	G	K	L	T	L	P	R	V	E	Q	A	V	N	D	A	A
Query Conservation																											.	.														.	.	.																		.
Alig confidence																											.	.														.	.	.																		.
Template Conservation
Template Sequence		V	I	F	K	P	Y	D	A	E	Q	L	K	F	I	L	S	K	Y	A	E	Y	G	L	I	K	G	T	Y	D	D	E	I	L	S	Y	I	A	A	I	S	A	K	E	H	G	D	A	R	K	A	V	N	L	L	F	R	A	A	Q	L	A	S	G	G	G	I	I	R	K	E	H	V	D	K	A	I	V	D	Y	E
Template Known Secondary structure																							T	S		T	T	S			S												T	T																		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		211	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	T	P	F	H	W	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	R	L	I	E	A	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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