Job Description P28630 Confidence 34.84% Date Thu Jan 5 11:44:59 GMT 2012 Rank 117 Aligned Residues 69 % Identity 14% Template c2krkA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:26s protease regulatory subunit 8; PDBTitle: solution nmr structure of 26s protease regulatory subunit 82 from h.sapiens, northeast structural genomics consortium3 target target hr3102a Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L	E	L	D	D	A	A	N	Q	V	L	C	Y	C	Y	E	G	.	.	.	.	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	W	P	D	G	K	L	T	L	P	R	V	E	Q	A	V
Query Conservation																																										.	.	.	.
Alig confidence																															.											.	.	.	.
Template Conservation																															.
Template Sequence		H	H	H	S	H	P	N	E	E	A	R	L	D	I	L	K	I	H	S	R	K	M	N	L	T	R	G	I	N	.	L	R	K	I	A	E	L	M	P	G	A	S	G	A	E	V	K	G	V	C	T	E	A	G	M	Y	A	L	R	E	R	R	V	H	V	T	Q	E	D	F	E	M	A	V
Template Known Secondary structure																				T	T	T	S				T	T			.							T		S	S																				T	T		S
Template Predicted Secondary structure																															.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions