Job Description P28630 Confidence 88.66% Date Thu Jan 5 11:44:59 GMT 2012 Rank 72 Aligned Residues 122 % Identity 11% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	L	R	A	Q	L	N	E	G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	D	W	N	A	I	F	S	L	C	Q	A	M	S	L	F	A	S	R	Q	T	L	L	L	L	L	P	E
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	L	V	Y	V	L	R	H	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	E	A	G	K	N	A	A	Y	I	D	A	A	S	M	.	.	.	.	.	.	.	.	.	.	.	P	L	T	D	A	A	F	E	A	E	Y	L	A	V	D	Q	V	E
Template Known Secondary structure														S						S	S	S	T	T	T	T													T	T	T								T	T	T	S	.	.	.	.	.	.	.	.	.	.	.				G	G	G	G	G		S						S	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.												.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		N	G	P	N	A	A	I	N	E	Q	L	L	T	L	T	G	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	.	.	.	S	V	Q	V	T	C	Q	T
Query Conservation																																																	.	.	.
Alig confidence																																						.	.										.	.	.
Template Conservation																																						.	.
Template Sequence		K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	F	R	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	Q	Q	L	.	.	V	I	R	E	D	L	R	T	R	M	A	Y	C	L	V	Y	E	V	K	P
Template Known Secondary structure					S																	T									S	S		T	T	T	S	.	.	S									G	G	G	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions