Job Description P28630 Confidence 95.13% Date Thu Jan 5 11:44:59 GMT 2012 Rank 53 Aligned Residues 189 % Identity 15% Template c2dhrC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:ftsh; PDBTitle: whole cytosolic region of atp-dependent metalloprotease2 ftsh (g399l) Resolution 3.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																															.																															.	.	.	.
Query SS confidence																																															.																															.	.	.	.
Query Sequence		G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	D	.	W	N	A	I	F	S	L	C	Q	A	M	S	L	F	A	S	R	Q	T	L	L	L	L	L	P	E	N	G	P	N	.	.	.	.
Query Conservation																																															.																															.	.	.	.
Alig confidence																																															.																															.	.	.	.
Template Conservation
Template Sequence		R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	R	V	P	F	I	T	A	S	G	S	D	F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	R	G	S
Template Known Secondary structure					S							S	T	T	S	S												T	T								G	G	G	G	T	S	S		T	T											T	T	S	T	T	S	S	S								G	G	G	T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
											91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	A	I	N	E	Q	L	L	T	L	T	G	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	S	V	Q	V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L	E
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																								.
Template Conservation																																																		.
Template Sequence		G	V	G	G	G	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	K	D	T	A	I	V	V	M	A	A	T	N	R	P	D	I	L	D	P	A	L	L	R	P	.	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	I	L	R	I	H	A	R	G	K	P	L	A
Template Known Secondary structure		S	T	T	T	S	S														G	G	G			S	S										S		G	G	G	S		T	T	T	S	S	T	.	T	S	S																					T	T	S	S	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		L	D	D	A	A	N	Q	V	L	C	Y	C	Y	E	G	.	.	.	.	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	W	P	D	G	K	L	T	L	P	R	V	E	Q	A	V
Query Conservation																	.	.	.	.
Alig confidence		.															.	.	.	.
Template Conservation		.
Template Sequence		.	E	D	V	D	L	A	L	L	A	K	R	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L	E	E	A	A
Template Known Secondary structure		.		S	S	T	T					T	T	S		S																							S	S			S
Template Predicted Secondary structure		.
Template SS confidence
			346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions