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Job DescriptionP28630
Confidence94.53%DateThu Jan 5 11:44:59 GMT 2012
Rank56Aligned Residues189
% Identity14%Templatec1iy2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60 .........70.........80..
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Query Sequence  QLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD. . . . . WNAIFSLCQAMSLFASRQTLLL
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Template Sequence  SRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFETAKRHA. . . . PCIVFI
Template Known Secondary structure  TT






TTSSTT

STTTTS
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   179180.........190.........200.........210.........220.........230.........240........ .250....
 
   83......90.........100. ........110.........120.........130.... .....140.........150..
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Query Sequence  LLPENGPNAAINEQLLTLT. . . . . . . GLLHDDLLLIVRGNKLSKAQENAAWFTALANRS. . . VQVTCQTPEQAQLPRWVA
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Template Sequence  DEIDAVGRKNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDP. . . . . . ALLRPGRFDRQIAIDAPDVKGREQILR
Template Known Secondary structure  T


TT

TT

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   255....260.........270.........280.........290.........300. ........310.........320........
 
   153......160.........170...... ...180.........190.. .......200.......
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Query Sequence  ARAKQLNLELDDAANQVLCYCYEG. NLLALAQALERLSLLW. . . PDGKLTLPRVEQAVN
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Template Sequence  IHARGKPLAEDVD. LALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
Template Known Secondary structure  TTS
B
TT

.T
TT

TT

SB
T
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   337..340......... 350.........360.........370.........380.........390....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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