Job Description P28630 Confidence 99.71% Date Thu Jan 5 11:44:59 GMT 2012 Rank 7 Aligned Residues 281 % Identity 16% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																							.	.	.	.										.	.
Query SS confidence																																																							.	.	.	.										.	.
Query Sequence		E	Q	L	R	A	Q	L	N	E	G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	.	.	.	.	D	W	N	A	I	F	S	L	C	.	.	Q	A	M	S	L	F	A	S	R	Q	T	L
Query Conservation																																																							.	.	.	.										.	.
Alig confidence																																																							.	.	.	.										.	.
Template Conservation
Template Sequence		K	R	L	K	H	Y	V	K	T	G	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E	K	V	K	E	F	A	R	T	K	P	I	G	G	A	S	F	K	I	I
Template Known Secondary structure									T	T	T									S		T	T	S	S	T	T												G	G	G										T	T	T	S	S													T	T	S			S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	L	P	E	N	G	P	N	A	A	I	N	E	Q	L	L	T	L	T	G	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	S	V	Q	V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L
Query Conservation
Alig confidence																								.																				.	.	.	.	.	.
Template Conservation																								.																				.	.	.	.	.	.
Template Sequence		F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	.	F	S	S	N	V	R	F	I	L	S	C	N	Y	S	S	K	I	I	E	.	.	.	.	.	.	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	L
Template Known Secondary structure					T	G	G	G	S															.	T	T	T	T								S		G	G	G	S			.	.	.	.	.	.				T	T																										T
Template Predicted Secondary structure																								.																				.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		E	L	D	D	A	A	N	Q	V	L	C	Y	C	Y	E	G	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	W	P	D	G	K	L	T	L	P	R	V	E	Q	A	V	N	D	A	A	H	F	T	P	F	H	W	V	D	A	L	L	M	G	K	S	K	R	A	L	H	I	L	Q	Q	.	L	R	L	E
Query Conservation																																																																													.
Alig confidence																																	.	.																																											.
Template Conservation																																	.	.
Template Sequence		E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	E	G	D	M	R	R	A	I	N	I	L	Q	A	A	A	A	L	.	.	D	K	K	I	T	D	E	N	V	F	M	V	A	S	R	A	R	P	E	D	I	R	E	M	M	L	L	A	L	K	G	N	F	L	K	A	R	E	K	L	R	E	I	L	L	K	Q
Template Known Secondary structure																T	T														T	T	.	.		S												T																	T																T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	E	P	V	I	L	L	R	T	L	Q	R	E	L	L	L	L	V	N	L	K	R	Q	S	A	H	T	P	L	R	A	L	F	D	K	H	R	V	W	Q	N	R	R	G	M	M	G	E	A	L	N	R	L	S	Q	T	Q	L	R	Q	A	V	Q	L	L	T	R	T	E	L	T	L	K	Q	D	Y	G	Q	S
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Sequence		G	L	S	G	E	D	V	L	V	Q	M	H	K	E	V	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	I	E	E	P	K	K	V	L	L	A	D	K	I	G	E	Y	N	F	R	L	V	E	G	A	.	.	N
Template Known Secondary structure																G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																										.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.																																			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.
		320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	W	A	E	L	E	G	L	S	L	L	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	I	Q	L	E	A	L	L	A	Q	F	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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