Job Description P28630 Confidence 95.26% Date Thu Jan 5 11:44:59 GMT 2012 Rank 51 Aligned Residues 189 % Identity 14% Template c1hqcB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:ruvb; PDBTitle: structure of ruvb from thermus thermophilus hb8 Resolution 3.20 Å

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		7	.	.	10	.	.	.	.						.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		E	Q	L	R	A	Q	L	N	.	.	.	.	.	E	G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	D	W	N	A	I	F	S	L	C	Q	A	M	S	L	F	A	S	R	Q	T	L	L
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																													.	.	.	.																						.	.
Template Conservation																																											.	.	.	.																						.	.
Template Sequence		Q	K	L	R	V	Y	L	E	A	A	K	A	R	K	E	P	L	E	H	L	L	L	F	G	P	P	G	L	G	K	T	T	L	A	H	V	I	A	H	E	L	.	.	.	.	G	V	N	L	R	V	T	S	G	P	A	I	E	K	P	G	D	L	A	A	I	.	.	L	A	N	S	L	E	E	G	D	I	L	F
Template Known Secondary structure													S	S		S											T	T															.	.	.	.	T								T	T	T			S								.	.			T	T			T	T
Template Predicted Secondary structure																																											.	.	.	.																						.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.																		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	L	P	E	N	G	P	N	A	A	I	N	E	Q	L	L	T	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	S	V	Q	V	T	C	Q	T	P	E	Q
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																																																														.	.	.	.	.
Template Sequence		I	D	E	I	H	R	L	S	R	Q	A	E	E	H	L	Y	P	A	M	E	D	F	V	M	D	I	V	I	G	Q	G	P	A	A	R	T	I	R	L	E	L	P	R	F	T	L	I	G	A	T	T	R	P	G	L	I	T	A	P	L	.	.	.	.	.	L	S	R	F	G	I	V	E	H	L	E	Y	Y	T	P
Template Known Secondary structure			T	T	T	T	S																S						B	S	S	S	S	S		B																S	S		S	S		S		S	T	.	.	.	.	.	T	T	T		S
Template Predicted Secondary structure																																																														.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L	E	L	D	D	A	A	N	Q	V	L	C	Y	C	Y	E	G	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	W	.	.	.	P	D	G	K	L	T	L	P	R	V	E	Q	A	V
Query Conservation																																																		.	.	.
Alig confidence																																																		.	.	.
Template Conservation
Template Sequence		E	E	L	A	Q	G	V	M	R	D	A	R	L	L	G	V	R	I	T	E	E	A	A	L	E	I	G	R	R	S	R	G	T	M	R	V	A	K	R	L	F	R	R	V	R	D	F	A	Q	V	A	G	E	E	V	I	T	R	E	R	A	L	E	A	L
Template Known Secondary structure														T	T	S			B												S		S													T	T	T	S	S		S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions