Job Description P28630 Confidence 37.90% Date Thu Jan 5 11:44:59 GMT 2012 Rank 112 Aligned Residues 45 % Identity 22% Template c1h3oA_ PDB info PDB header:transcription/tbp-associated factors Chain: A: PDB Molecule:transcription initiation factor tfiid 135 kda PDBTitle: crystal structure of the human taf4-taf122 (tafii135-tafii20) complex Resolution 2.3 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L	E	.	L	D	D	A	A	N	Q	V	L	C	Y	C	Y	E	G	N	L	L	A	L	A	Q	A	L	E	R	L	S
Query Conservation																						.
Alig confidence																						.														.	.	.
Template Conservation																																				.	.	.
Template Sequence		L	L	Q	A	P	L	Q	R	R	I	L	E	I	G	K	K	H	G	I	T	E	L	H	P	D	V	V	S	Y	V	S	H	A	T	.	.	.	Q	Q	R	L	Q	N	L	V	E	K	I	S
Template Known Secondary structure		S															T	T	T						T	T										.	.	.
Template Predicted Secondary structure																																				.	.	.
Template SS confidence
		871	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.				.	.	.	.	.	910	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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