Return to main results Retrieve Phyre Job Id

Job DescriptionP06710
Confidence97.91%DateThu Jan 5 10:59:20 GMT 2012
Rank161Aligned Residues124
% Identity16%Templated2cdna1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90...... ...
Predicted Secondary structure 





























.....................


Query SS confidence 























































. . . . . . . . . . . . . . . . . . . . .


Query Sequence  YLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAA. . . . . . . . . . . . . . . . . . . . . SRT
Query Conservation   
  

 
 



 
   
  
                                  .....................   
Alig confidence 
























........................






.....................


Template Conservation 
 
 
  







  

  
   ........................ 
                             
Template Sequence  VLLLGPPGAGKGTQAVKLAEKLGIP. . . . . . . . . . . . . . . . . . . . . . . . QISTGELFRRNIEEGTKLGVEAKRYLDAGDL
Template Known Secondary structure 

TTSST

........................TT
T

Template Predicted Secondary structure 







........................




Template SS confidence 















































































   3......10.........20....... ..30.........40.........50........
 
   100.........110.........120.........130.........140.........150.........160.........170.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  KVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALD
Query Conservation       
                
 



   
       


 

        
            
 


         
Alig confidence 


























































.....















Template Conservation                                                        
    .....     
   
      
Template Sequence  VPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSE. . . . . EVLLERLKGRGRADDT
Template Known Secondary structure 

TTSGGGTT
S


STT





.....

TT
S
Template Predicted Secondary structure 



















.....






Template SS confidence 















































































   5960.........70.........80.........90.........100.........110....... ..120.........130...
 
   180.........190...
Predicted Secondary structure 
Query SS confidence 













Query Sequence  VEQIRHQLEHILNE
Query Conservation         
  
   
Alig confidence 













Template Conservation                
Template Sequence  DDVILNRMKVYRDE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 













   134.....140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions