Job Description P06710 Confidence 96.60% Date Thu Jan 5 10:59:20 GMT 2012 Rank 354 Aligned Residues 119 % Identity 21% Template c4a4zA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:antiviral helicase ski2; PDBTitle: crystal structure of the s. cerevisiae dexh helicase ski2 bound to2 amppnp Resolution 2.40 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																								.	.	.																		.	.	.	.	.	.
Query SS confidence																																																								.	.	.																		.	.	.	.	.	.
Query Sequence		N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	.	.	.	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	.	.	.	.	.	.
Query Conservation																																																								.	.	.																		.	.	.	.	.	.
Alig confidence									.	.	.																																													.	.	.																		.	.	.	.	.	.
Template Conservation									.	.	.
Template Sequence		Y	H	L	E	Q	G	D	.	.	.	S	V	F	V	A	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	M	A	H	R	N	M	T	K	T	I	Y	T	S	P	I	K	A	L	S	N	Q	K	F	R	D	F	K	E	T	F	V	N	I	G	L	I	T	G	D	V	Q	I	N	P	D	A	N	C	L
Template Known Secondary structure						T	T		.	.	.								T	T	S		S														T	T								S		G	G	G										T	T									S	S					T	T	S	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		339	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
					101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																	.	.	.	.
Query SS confidence		.	.	.																																	.	.	.	.
Query Sequence		.	.	.	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	.	.	.	.	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T
Query Conservation		.	.	.																																	.	.	.	.
Alig confidence		.	.	.									.	.																							.	.	.	.												.	.	.
Template Conservation													.	.																																						.	.	.
Template Sequence		I	M	T	T	E	I	L	R	S	M	L	.	.	Y	R	G	A	D	L	I	R	D	V	E	F	V	I	F	D	E	V	H	Y	V	N	D	Q	D	R	G	V	V	W	E	E	V	I	I	M	L	.	.	.	P	Q	H	V	K	F	I	L	L	S
Template Known Secondary structure													.	.			T		S	G	G	G	G									T	T				T	T		T	T										S	.	.	.		T	T
Template Predicted Secondary structure													.	.																																						.	.	.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.				.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions