Job Description P06710 Confidence 99.81% Date Thu Jan 5 10:59:20 GMT 2012 Rank 68 Aligned Residues 187 % Identity 13% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V
Query Conservation
Alig confidence																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	.	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X
Template Known Secondary structure														T	T					.								S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	T	S	S										T	T
Template Predicted Secondary structure																				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.		.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.																	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
		102	.	.		.	.	.	.																		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																													.	.	.
Query SS confidence					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																													.	.	.
Query Sequence		E	D	T	.	R	D	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	.	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	.	.	.
Query Conservation					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																													.	.	.
Alig confidence					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.																													.	.	.
Template Conservation
Template Sequence		D	A	L	Y	E	K	I	W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	K	N	S	K	L	S	I	I	C	V	G	G	H	N	V	T	I
Template Known Secondary structure													S																		S		G	G	G	S											S	S	S			T													S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
			160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																												.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.												.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.												.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	Q	K	L	P	V	T	I	L	S	R	C	.	.	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	H	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	P	R	A	L	Q	L	L	A	R	A
Query Conservation		.												.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.												.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	Q	I	N	I	X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	V	D	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N	K	I	T	Q	L	I	A	K	N
Template Known Secondary structure							T						T	T																																			T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		704	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.
		210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		A	E	.	.	.	G	S	L	R	D	A	L	S	L	T	D	Q	A	I
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		V	A	N	V	S	G	S	T	E	K	A	F	K	I	C	E	A	A	V
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		792	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions