Job Description P06710 Confidence 99.84% Date Thu Jan 5 10:59:20 GMT 2012 Rank 56 Aligned Residues 183 % Identity 22% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40									.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.
Query Sequence		F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	.	.	.	.	.	.	.	.	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R
Query Conservation																												.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	R	V	I	G	Q	D	E	A	V	V	A	V	A	K	A	V	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D
Template Known Secondary structure			T	T	S		S																T	T	T		S		T	T	S		S							S		T	T	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.																						.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	.	.	.	.	.	.	H	V	K	F	L	L	A	T	T	D	P	Q
Query Conservation																																																																.	.	.	.	.	.
Alig confidence																.																	.	.	.	.																												.	.	.	.	.	.
Template Conservation																.																	.	.	.	.
Template Sequence		E	E	S	M	I	R	I	D	M	S	E	Y	M	E	.	K	H	S	T	S	L	T	E	K	V	R	R	K	P	Y	S	.	.	.	.	V	V	L	L	D	A	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	E	D	G	R	L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	G	A
Template Known Secondary structure		T	T							G	G	G	G		S	.	S													S	S	S	.	.	.	.							G	G	G	S															S	B					B		T	T								S	S	S	T
Template Predicted Secondary structure																.																	.	.	.	.
Template SS confidence
		566	.	.	.	570	.	.	.	.	.	.	.	.	.		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.					.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
		161	.	.	.	.	.	.													.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.										.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.				.																									.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.				.																									.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		K	L	P	V	T	I	L	.	.	.	.	.	.	.	.	.	.	.	.	S	R	C	.	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	.	.	.	.	.	.	.	.	.	H	I	A	H	E	P	R	A	L	Q	L	L	A	R	A	.	.	.	A	E	G	S	L	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.				.																									.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.				.									.	.															.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																	.	.
Template Sequence		S	E	K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R	I	D	E	I	I	V	F	H	E	K	.	.	K	H	L	T	E	I	V	S	L	M	S	D	Q	L	T	K	R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R
Template Known Secondary structure		T													S						T	T	S	S									.	.																				T	T	T															G	G	G			T	T	T	T	T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.			.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
		216	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	S	L	T	D	Q	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	R	R	A	I	Q	K	H	V
Template Known Secondary structure		T									T
Template Predicted Secondary structure
Template SS confidence
		764	.	.	.	.	.	770	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions