Job Description P06710 Confidence 99.63% Date Thu Jan 5 10:59:20 GMT 2012 Rank 84 Aligned Residues 181 % Identity 19% Template c3pxgA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex Resolution 3.65 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	K	W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G
Query Conservation
Alig confidence																																				.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	A	I	A	K	E	D	S	L	D	P	V	I	G	R	S	K	E	I	Q	R	V	I	E	V	L	S	R	R	T	K	N	N	.	P	V	L	I	G	E	P	G	V	G	K	T	A	I	A	E	G	L	A	Q	Q	I	I	N	N	E	V	P	E	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S	S		S																				S	S	S			.					S		T	T	T	T	T													S	S		S		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.																	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	K	R	V	M	T	L	E	.	.	.	.	.	.	.	D	R	L	K	K	V	M	D	E	I	R	Q	A	G	N	I	.	.	.	.	I	L	F	I	D	A	K	P	S	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	Q	C	I	G	A	T	T	L	D	E	Y	R	K	Y	I
Template Known Secondary structure		S	S								.	.	.	.	.	.	.	T	T										T					.	.	.	.										T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									T	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.																	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.								.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.															.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																							.	.	.	.	.	.
Query SS confidence																																			.	.	.	.																							.	.	.	.	.	.
Query Sequence		K	L	P	V	T	I	L	S	R	C	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	.	.	.	.	E	H	I	A	H	E	P	R	A	L	Q	L	L	A	R	A	A	E	G	S	L	R	.	.	.	.	.	.	D	A	L	S	L	T	D	Q	A	I	A
Query Conservation																																			.	.	.	.																							.	.	.	.	.	.
Alig confidence																																			.	.	.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	D	A	A	L	E	R	R	F	Q	P	I	Q	V	D	Q	P	S	V	D	E	S	I	Q	I	L	Q	G	L	R	D	R	Y	E	A	H	H	R	V	S	I	T	D	D	A	I	E	A	A	V	K	L	S	D	R	Y	I	S	D	R	F	L	P	D	K	A	I	D	L	I	D	E	A	G	S
Template Known Secondary structure		T	T		S					S																					T	T	T	T	S	G	G	G	S	S		S																S	S			S		T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions