Job Description P06710 Confidence 96.38% Date Thu Jan 5 10:59:20 GMT 2012 Rank 378 Aligned Residues 128 % Identity 17% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.															.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	R	E	I	E	Q	G	R
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		Q	H	K	S	I	R	P	L	L	E	.	.	.	.	.	.	.	G	R	D	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L	I	L	S	P	T	R	E	L	A	M	Q	T	F	G	V	L	K	E	L	M	T	H	H
Template Known Secondary structure												.	.	.	.	.	.	.	T									T	T	S																	T	T			G	G	G									S	S															T	T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100																	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Query Sequence		F	V	D	L	I	E	I	D	A	A	S	R	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	.	L	L	K	T	L	E	E	P	P	E	H
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																											.
Template Conservation																																											.
Template Sequence		V	H	T	Y	G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	.	P	G	F	M	Y	K	N	L	Q	C	L	V	I	D	E	A	D	R	I	L	D	V	G	F	E	E	E	L	K	Q	I	I	K	L	L	P	T	R
Template Known Secondary structure			S							S	S	S														S																	.	T	T				T	T								S							T	T												S		S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	F	L	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	T	M	L	F	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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