Job Description P06710 Confidence 95.88% Date Thu Jan 5 10:59:20 GMT 2012 Rank 429 Aligned Residues 114 % Identity 18% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		E	T	A	L	D	I	A	R	K	K	H	H	K	E	C	E	E	L	L	E	Q	A	Q	A	N	K	E	M	R	.	.	I	L	M	L	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	K	L	G	Q	S	V	T	T	I	P	T	V	G	F	N	V	E	T	V	T	Y	K	N	V	K	F	N	V	W	D	V
Template Known Secondary structure											T	T		T	T								T								.	.						S	T	T	S	S											S	S								S	S									S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.			.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
			74	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.						.	.	.
Query SS confidence		.						.	.	.
Query Sequence		.	G	V	C	D	N	.	.	.	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I
Query Conservation		.						.	.	.
Alig confidence		.						.	.	.
Template Conservation
Template Sequence		G	G	Q	D	K	I	R	P	L	W	R	H	Y	Y	T	G	T	Q	G	L	I	F	V	V	D	C	A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D	R	E	M	R	D	A	I	I	L	I	F
Template Known Secondary structure					G	G	G	S	T	T	G	G	G	G	T	T	T										S	S			T	T													T	S	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions