Job Description P06710 Confidence 94.54% Date Thu Jan 5 10:59:20 GMT 2012 Rank 487 Aligned Residues 88 % Identity 13% Template c3l0oB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:transcription termination factor rho; PDBTitle: structure of rna-free rho transcription termination factor from2 thermotoga maritima Resolution 2.35 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.				.	.	.	.	110	.	.	.	.
Predicted Secondary structure																															.	.	.																																					.	.	.
Query SS confidence																															.	.	.																																					.	.	.
Query Sequence		Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	.	.	.	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	.	.	.	D	L	L	D	N	V	Q	Y	A
Query Conservation																															.	.	.																																					.	.	.
Alig confidence																															.	.	.																																					.	.	.
Template Conservation
Template Sequence		G	M	I	V	A	P	P	K	A	G	K	T	T	I	L	K	E	I	A	N	G	I	A	E	N	H	P	D	T	I	R	I	I	L	L	I	D	E	R	P	E	E	V	T	D	I	R	E	S	T	N	A	I	V	I	A	A	P	F	D	M	P	P	D	K	Q	V	K	V	A	E	L	T	L	E	M	A	K	R	L
Template Known Secondary structure								T	T	S	S																	T	T	S																			T	T	S		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	R	G	R	F	K	V	Y	L	I	D	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	F	N	Y	D	V	V	I	L	L	D	S	L
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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