Job Description P06710 Confidence 96.62% Date Thu Jan 5 10:59:20 GMT 2012 Rank 350 Aligned Residues 144 % Identity 17% Template c3dkpA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx52; PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp Resolution 2.10 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.												.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	.	.	.	.	.	.	.	.	.	.	.	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		M	Q	A	I	P	V	M	L	H	G	R	E	.	.	.	.	L	L	A	S	A	P	T	G	S	G	K	T	L	A	F	S	I	P	I	L	M	Q	L	K	Q	P	A	N	K	G	F	R	A	L	I	I	S	P	T	R	E	L	A	S	Q	I	H	R	E	L	I	K	I	S	E	G	T	G	F	R	I	H	M	I
Template Known Secondary structure										T	T			.	.	.	.							T	T	S																S			S	S	S								S	S															T	T	T	S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100																		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.												.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.												.
Query Sequence		D	A	A	S	R	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	.	.	S	F	N	A	L	L	K	T	L	E	E	.	P	P	E	H	V	K	F	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.												.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.												.
Template Conservation
Template Sequence		H	K	A	A	V	A	A	K	K	F	G	P	K	S	S	K	K	F	D	I	L	V	T	T	P	N	R	L	I	Y	L	L	K	Q	D	P	P	G	I	D	L	A	S	V	E	W	L	V	V	D	E	S	D	K	L	F	E	D	G	G	F	R	D	Q	L	A	S	I	F	L	A	C	T	S	H	K	V	R	R	A
Template Known Secondary structure									T	T	T	S	T	T	S																				S	S	S		S				T	T							S	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	T	D	P	Q	K	L	P	V	T	I	L	S	R	C	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	S	A	T	F	A	Y	D	V	E	Q	W	C	K	L	N	L	D
Template Known Secondary structure					S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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