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Job DescriptionP06710
Confidence96.33%DateThu Jan 5 10:59:20 GMT 2012
Rank384Aligned Residues157
% Identity18%Templatec3berA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable atp-dependent rna helicase ddx47; PDBTitle: human dead-box rna-helicase ddx47, conserved domain i in complex with2 amp
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20......... 30.........40.........50.........60.........70...
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Query Sequence  QTFADVVGQEHVLTALA. . . . . . . . . . . . . . . NGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPC. . . .
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Template Sequence  KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGR. . . DIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTP
Template Known Secondary structure 

TGGGT

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   24.....30.........40.........50.........60.. .......70.........80.........90.........100
 
   74.....80.........90.........100...... ...110...... ...120.........130..
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Query Sequence  . . . . . . GVCDNCREIEQGRFVDLIEIDAASRTKVEDTRD. . . . . . . . . . . . . LLDNVQYAPA. . RGRFKVYLIDEVHMLS
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Template Sequence  TRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL
Template Known Secondary structure  SGGGT


TTS
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   133.... ..140.........150.........160.........170..
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Query Sequence  RHSFN. ALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQ
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Template Sequence  NMDFETEVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALK
Template Known Secondary structure  TT
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   181........190.........200.........210.........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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