Job Description P06710 Confidence 96.33% Date Thu Jan 5 10:59:20 GMT 2012 Rank 384 Aligned Residues 157 % Identity 18% Template c3berA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx47; PDBTitle: human dead-box rna-helicase ddx47, conserved domain i in complex with2 amp Resolution 1.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence		Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	.	.	.	.
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																																			.	.	.	.
Template Conservation																																									.	.	.
Template Sequence		K	T	F	K	D	L	G	V	T	D	V	L	C	E	A	C	D	Q	L	G	W	T	K	P	T	K	I	Q	I	E	A	I	P	L	A	L	Q	G	R	.	.	.	D	I	I	G	L	A	E	T	G	S	G	K	T	G	A	F	A	L	P	I	L	N	A	L	L	E	T	P	Q	R	L	F	A	L	V	L	T	P
Template Known Secondary structure				T	G	G	G	T												T	T			S														T	T		.	.	.								T	T	S																	S			S	S							S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
								74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.														.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence		.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		.	.	.	.	.	.	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	D	N	V	Q	Y	A	P	A	.	.	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S
Query Conservation		.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence		.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		T	R	E	L	A	F	Q	I	S	E	Q	F	E	A	L	G	S	S	I	G	V	Q	S	A	V	I	V	G	G	I	D	S	M	S	Q	S	L	A	L	A	K	K	P	H	I	I	I	A	T	P	G	R	L	I	D	H	L	E	N	T	K	G	F	N	L	R	A	L	K	Y	L	V	M	D	E	A	D	R	I	L
Template Known Secondary structure		S																G	G	G	T								T	T	S											T			S																S	T	T				T	T								S
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		133	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	H	S	F	N	.	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q	K	L	P	V	T	I	L	S	R	C	L	Q
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		N	M	D	F	E	T	E	V	D	K	I	L	K	V	I	P	R	D	R	K	T	F	L	F	S	A	T	M	T	K	K	V	Q	K	L	Q	R	A	A	L	K
Template Known Secondary structure			T	T											S	S		S	S	S							S	S														S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions