Job Description P06710 Confidence 97.05% Date Thu Jan 5 10:59:20 GMT 2012 Rank 297 Aligned Residues 121 % Identity 18% Template c2xgjA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:atp-dependent rna helicase dob1; PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance Resolution 2.90 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.								.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																.																													.	.	.	.	.	.	.
Query SS confidence																																.																													.	.	.	.	.	.	.
Query Sequence		T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	.	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	.	.	.	.	.	.	.	Q	G	R	F	V	D	L	I	E	I	D	A	A	S
Query Conservation																																.																													.	.	.	.	.	.	.
Alig confidence													.	.	.																	.								.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation													.	.	.																									.	.	.	.	.
Template Sequence		D	T	A	I	S	C	I	D	R	G	E	.	.	.	S	V	L	V	S	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	Q	S	L	.	.	.	.	.	K	N	K	Q	R	V	I	Y	T	S	P	I	K	A	L	S	N	Q	K	Y	R	E	L	L	A	E	F	G	D	V	G	L	M	T	G	D	I
Template Known Secondary structure											T		.	.	.								T	T	S															.	.	.	.	.		T	T								S	S																S							S	S
Template Predicted Secondary structure													.	.	.																									.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		98	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																			.
Query SS confidence					.	.	.	.	.	.	.	.	.																																			.
Query Sequence		R	T	K	.	.	.	.	.	.	.	.	.	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	.	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T
Query Conservation					.	.	.	.	.	.	.	.	.																																			.
Alig confidence					.	.	.	.	.	.	.	.	.									.	.																									.
Template Conservation																						.	.
Template Sequence		T	I	N	P	D	A	G	C	L	V	M	T	T	E	I	L	R	S	M	L	.	.	Y	R	G	S	E	V	M	R	E	V	A	W	V	I	F	D	E	V	H	Y	M	R	D	K	E	R	G	V	V	W	E	E	T	I	I	L	L	P	D	K	V	R	Y	V	F	L	S
Template Known Secondary structure					T	T		S														.	.			T		T	T	G	G	G								T	G	G	G	G	G		T	T	T											S		T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions