Job Description P06710 Confidence 99.84% Date Thu Jan 5 10:59:20 GMT 2012 Rank 55 Aligned Residues 204 % Identity 20% Template c2r65A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cell division protease ftsh homolog; PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex Resolution 3.30 Å

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		9	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.												.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure							.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	W	R	P	Q	.	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	.	.	.	.	.	.	.	.	.	.	.	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C
Query Conservation							.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																					.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	K	P	N	V	R	F	K	D	M	A	G	N	E	E	A	K	E	E	V	V	E	I	V	D	F	L	K	Y	P	E	R	Y	A	N	L	G	A	K	I	P	K	G	V	L	L	V	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	G	E	A	H	V	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									G	G	G	S		S							T	T									S						T	T	T					S							S	S	S	S	S													T			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																										.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Query Sequence		D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	.	.	.	.	.	.	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	.	.	.	.	.	.	.	.	S	R	H	S	F	N	A	L	L	K	T
Query Conservation																										.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.															.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	S	M	G	G	S	S	F	I	E	M	F	V	G	L	G	A	S	R	V	R	D	L	F	E	T	A	K	K	Q	.	.	.	.	A	P	S	I	I	F	I	D	E	I	D	A	I	G	K	N	D	E	R	E	Q	T	L	N	Q	L	L	A	E	M	D	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.						T	G	G	G	G	S			S	S	S		S	T	T											T	.	.	.	.		S						T	T	G	G	G	T						S	T	T	T	S	S	S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.
Template SS confidence
															231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.
Predicted Secondary structure																														.	.	.																																											.
Query SS confidence																														.	.	.																																											.
Query Sequence		L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q	K	L	P	V	T	I	L	S	R	C	.	.	.	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	H	I	A	H	E	P	R	A	L	Q	L	L	A	R	A	A	E	G	.	S	L	R	D	A	L
Query Conservation																														.	.	.																																											.
Alig confidence																														.	.	.																																.											.
Template Conservation																																																																.
Template Sequence		F	G	S	E	N	A	P	V	I	V	L	A	A	T	N	R	P	E	I	L	D	P	A	L	M	R	P	G	R	F	D	R	Q	V	L	V	D	K	P	D	F	N	G	R	V	E	I	L	K	V	H	I	K	G	V	K	L	A	N	D	V	N	.	L	Q	E	V	A	K	L	T	A	G	L	A	G	A	D	L	A
Template Known Secondary structure			S		S	S	S									S		T	T	S	S		G	G	G	G	S	T	T	S	S								S															T	T	S				S				.										S			S
Template Predicted Secondary structure																																																																.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		219	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		S	L	T	D	.	.	.	.	Q	A	I	A	S	G	D	G	Q	V	S	T	Q	A	V	S	A	M	L
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		N	I	I	N	E	A	A	L	L	A	G	R	N	N	Q	K	E	V	R	Q	Q	H	L	K	E	A	V
Template Known Secondary structure																	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions