Job Description P06710 Confidence 97.60% Date Thu Jan 5 10:59:20 GMT 2012 Rank 193 Aligned Residues 119 % Identity 17% Template c2r2aB_ PDB info PDB header:toxin Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of n-terminal domain of zonular occludens toxin from2 neisseria meningitidis Resolution 1.82 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																				.	.	100	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	K	V
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	L	I	T	G	T	P	G	S	G	K	T	L	K	X	V	S	X	X	A	N	D	E	X	F	K	P	D	E	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	R	K	V	F	T	N	I	K	G	L	K	I	P	H	T	Y	I	E	T	D	A	K	K	L	P	K	S	T	D	E	Q	L	S	A
Template Known Secondary structure								T	T	S	S													G	G	G	S			T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	B		S						B			T	T	T		S	S			S	S	S		B	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.														.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.																		.																						.
Query SS confidence																																	.	.	.	.	.																		.																						.
Query Sequence		E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	.	.	.	.	.	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	.	V	K	F	L	L	A	T	T	D	P	Q	K	L	P	V	T	I	L	S	R	C	.	L	Q	F	H
Query Conservation																																	.	.	.	.	.																		.																						.
Alig confidence																	.	.	.	.	.												.	.	.	.	.																		.																						.
Template Conservation																	.	.	.	.	.
Template Sequence		H	D	X	Y	E	W	I	K	K	P	E	N	I	G	S	.	.	.	.	.	I	V	I	V	D	E	A	Q	D	V	W	P	A	R	S	A	G	S	K	I	P	E	N	V	Q	W	L	N	T	H	R	H	Q	G	I	D	I	F	V	L	T	Q	G	P	K	L	L	D	Q	N	L	R	T	L	V	R	K	H	Y	H
Template Known Secondary structure		G	G					T	T	S	G	G	G	T	T		.	.	.	.	.					T	T	G	G	G	T	S	B				T	T									G	G	G	G	G	G	G	T	T								S		G	G	G	B
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		175	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		147	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions