Job Description P06710 Confidence 95.75% Date Thu Jan 5 10:59:20 GMT 2012 Rank 442 Aligned Residues 108 % Identity 17% Template c2qq0B_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidine kinase; PDBTitle: thymidine kinase from thermotoga maritima in complex with2 thymidine + appnhp Resolution 1.50 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.
Predicted Secondary structure																					.																																																								.	.	.
Query SS confidence																					.																																																								.	.	.
Query Sequence		L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	.	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	V	E	D	T	R	D	L	.	.	.	L	D
Query Conservation																					.																																																								.	.	.
Alig confidence							.	.	.												.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation							.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	K	L	T	.	.	.	V	I	T	G	P	M	Y	S	G	K	T	T	E	L	L	S	F	V	E	I	Y	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	K	K	K	V	A	V	F	K	P	K	S	T	M	I	V	S	H	V	E	A	H	V	I	E	R	P
Template Known Secondary structure							.	.	.					S	T	T	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T												B						B					S	S	G
Template Predicted Secondary structure							.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.				.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																							.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	Q	K	L	P	V	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	M	R	K	Y	I	E	E	D	T	R	G	V	F	I	D	E	V	Q	F	F	N	P	S	L	F	E	V	V	K	D	L	L	D	R	G	I	D	V	F	C	A	G	L	D	L	T	H	K	Q	N	P	F	E	T	T
Template Known Secondary structure		G	G	G	G	G	G			T	T									G	G	G	S		T	T											T	T									S	B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions