Job Description P06710 Confidence 99.61% Date Thu Jan 5 10:59:20 GMT 2012 Rank 85 Aligned Residues 242 % Identity 20% Template c2qbyB_ PDB info PDB header:replication/dna Chain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																																													.	.	.
Query SS confidence																					.	.	.																																													.	.	.
Query Sequence		F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	.	.	.	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	I	T	A	T	P	C	G	V	C	D	.	.	.	N	C	R	E	I	E	Q	G	R	F	V
Query Conservation																					.	.	.																																													.	.	.
Alig confidence																					.	.	.																																													.	.	.
Template Conservation
Template Sequence		F	K	E	I	P	F	R	E	D	I	L	R	D	A	A	I	A	I	R	Y	F	V	K	N	E	V	K	F	S	N	L	F	L	G	L	T	G	T	G	K	T	F	V	S	K	Y	I	F	N	E	I	E	E	V	K	K	E	D	E	E	Y	K	D	V	K	Q	A	Y	V	N	C	R	E	V	G	G	T	P	Q	A
Template Known Secondary structure			S	S		T	T																	T	T												T	T	S	S																			S	S	S	S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		89	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160
Predicted Secondary structure							.	.	.	.	.																																																																			.	.	.
Query SS confidence							.	.	.	.	.																																																																			.	.	.
Query Sequence		D	L	I	E	I	.	.	.	.	.	D	A	A	S	R	T	K	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	F	N	A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T	T	D	P	.	.	.	Q
Query Conservation							.	.	.	.	.																																																																			.	.	.
Alig confidence							.	.	.	.	.																																																																			.	.	.
Template Conservation
Template Sequence		V	L	S	S	L	A	G	K	L	T	G	F	S	V	P	K	H	G	I	N	L	G	E	Y	I	D	K	I	K	N	G	T	R	N	I	R	A	I	I	Y	L	D	E	V	D	T	L	V	K	R	R	G	G	D	I	V	L	Y	Q	L	L	R	S	D	A	N	I	S	V	I	M	I	S	N	D	I	N	V	R	D
Template Known Secondary structure													S				S	S	S	S		T												S	S	S								T	T						S	T	T	S									T	S	S	S									S	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.
Predicted Secondary structure												.																												.	.														.	.	.															.	.
Query SS confidence												.																												.	.														.	.	.															.	.
Query Sequence		K	L	P	V	T	I	L	S	R	C	.	L	Q	F	H	L	K	A	L	D	V	E	Q	I	R	H	Q	L	E	H	I	L	N	E	E	H	I	A	.	.	H	E	P	R	A	L	Q	L	L	A	R	A	A	.	.	.	E	G	S	L	R	D	A	L	S	L	T	D	Q	A	.	.	I	A	S	G	D	G	Q	V
Query Conservation												.																												.	.														.	.	.															.	.
Alig confidence												.																												.	.														.	.	.															.	.
Template Conservation
Template Sequence		Y	M	E	P	R	V	L	S	S	L	G	P	S	V	I	F	K	P	Y	D	A	E	Q	L	K	F	I	L	S	K	Y	A	E	Y	G	L	I	K	G	T	Y	D	D	E	I	L	S	Y	I	A	A	I	S	A	K	E	H	G	D	A	R	K	A	V	N	L	L	F	R	A	A	Q	L	A	S	G	G	G	I	I
Template Known Secondary structure		T	S							T																										T	S		T	T	S			S												T	T																		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	Q	A	V	S	A	M	L	G	T	L	D	D	D	Q	A	L	S	L	V	E	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	E	H	V	D	K	A	I	V	D	Y	E	Q	E	R	L	I	E	A	V	K	A	L
Template Known Secondary structure																								S	S
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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