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Job DescriptionP06710
Confidence94.57%DateThu Jan 5 10:59:20 GMT 2012
Rank486Aligned Residues145
% Identity17%Templatec2pl3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20......... 30.........40.........50.........60.........70.......
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Query Sequence  QTFADVVGQEHVLTALA. . . . . . . . . . . . . . . NGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCD
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Template Sequence  TRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGK. . . DVLGAAKTGSGKTLAFLVPVLEA. . . . . . . . . . . . . . L
Template Known Secondary structure  SBGGGS


TT

B

TT
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   6970.........80.........90.........100....... ..110.........120.........130 .
 
   78.80.........90.........100.........110...... .
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Query Sequence  NCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . R
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Template Sequence  YRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGLKHEAERINNINILVCTPGRLLQHMDETVSFHA
Template Known Secondary structure  TT

GGG



SSTTTSS





TT
S

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   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   118.120.........130..... ....140.........150.........160.........170........
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Query Sequence  GRFKVYLIDEVHMLSRHS. FNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKAL
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Template Sequence  TDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSAT. . . QTKSVKDLARLS. LKNP
Template Known Secondary structure  TT

TTTTTTS
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   214.....220.........230.........240.........250..... ....260....... ..270.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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