Job Description P06710 Confidence 96.17% Date Thu Jan 5 10:59:20 GMT 2012 Rank 407 Aligned Residues 148 % Identity 14% Template c2p6uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:afuhel308 helicase; PDBTitle: apo structure of the hel308 superfamily 2 helicase Resolution 3.14 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		M	S	Y	Q	V	L	A	R	K	W	R	P	Q	T	F	A	D	V	V	G	Q	E	H	V	L	T	A	L	A	N	G	L	S	L	G	R	I	H	H	A	Y	L	F	S	G	T	R	G	V	G	K	T	S	I	A	R	L	L	A	K	G	L	N	C	E	T	G	.	.	.	.	.	.	I	T	A	T	P	C	G
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence																					.	.																.	.	.	.																												.	.	.	.	.	.
Template Conservation																					.	.																.	.	.	.
Template Sequence		M	K	V	E	E	L	A	E	S	I	S	S	Y	A	V	G	I	L	F	.	.	P	P	Q	A	E	A	V	E	K	V	F	S	G	K	N	.	.	.	.	L	L	L	A	M	P	T	A	A	G	K	T	L	L	A	E	M	A	M	V	R	E	A	I	K	G	G	K	S	L	Y	V	V	P	L	R	A	L	A	G
Template Known Secondary structure																S					.	.		S	S	T							T	T		S		.	.	.	.						S	S																			T								S	S
Template Predicted Secondary structure																					.	.																.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		V	C	D	N	C	R	E	I	E	Q	G	R	F	V	D	L	I	E	I	D	A	A	S	R	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	D	T	R	D	L	L	D	N	V	Q	Y	A	P	A	R	G	R	F	K	V	Y	L	I	D	E	V	H	M	L	S	R	H	S	.	.	.	.	F	N
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																									.	.	.	.
Template Conservation																																																		.	.
Template Sequence		E	K	Y	E	S	F	K	K	W	E	K	I	G	L	R	I	G	I	S	T	G	D	Y	E	S	R	D	E	H	L	G	D	C	D	I	I	V	T	T	S	E	K	A	D	S	L	I	R	.	.	N	R	A	S	W	I	K	A	V	S	C	L	V	V	D	E	I	H	L	L	D	S	E	K	R	G	A	T	L	E
Template Known Secondary structure								G	G	G	G	T	T	T								S			S				T	T	G	G	G		S															.	.	T	T		S	S	G	G	G							T	T	G	G	G	G	G		T	T	T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	K	T	L	E	E	P	P	E	H	V	K	F	L	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	V	T	K	M	R	R	M	N	K	A	L	R	V	I	G	L	S
Template Known Secondary structure												T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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